orange1.1g005060m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g005060m.g T023724_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.763 0.763
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g005060m B3 149 251

Links

Other B3 family TFs
Other Citrus sinensis TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IXR1 Saccharomyces cerevisiae YKL032C D
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I
Kwal_8043 Kluyveromyces waltii Kwal_8043 I
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I
13606_Multiple Saccharomyces paradoxus 13606_Multiple I
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I
SU7_2018 Saccharomyces arboricola SU7_2018 I
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I
CAGL0L02013g Candida glabrata CAGL0L02013g I
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I