Bra029011 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra029011 T031514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.875 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029011.1-P bHLH 75 126

Links

Other bHLH family TFs
Other Brassica rapa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ILR3 Arabidopsis thaliana AT5G54680 D 0.875
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.875
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.875
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.875
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.875
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I 0.845
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I 0.845
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I 0.845
mgf009119m Mimulus guttatus mgf009119m I 0.840
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.839
Bostr.26833s0797 Boechera stricta Bostr.26833s0797 I 0.875
Cagra.1629s0040 Capsella grandiflora Cagra.1629s0040 I 0.875
Carubv10026758m.g Capsella rubella Carubv10026758m.g I 0.875
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.875
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.875
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.875
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.875
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.875
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.875
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.875
MDP0000264803 Malus domestica MDP0000264803 I 0.875
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.875
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.875
Thhalv10014564m.g Eutrema salsugineum Thhalv10014564m.g I 0.875
PK23013.1 Cannabis sativa PK23013.1 I 0.875
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.875
Bo3g021940 Brassica oleracea Bo3g021940 I 0.883
Bra002964 Brassica rapa Bra002964 I 0.875
Bra022738 Brassica rapa Bra022738 I 0.875
ILR3 Arabidopsis lyrata fgenesh2_kg.8__1365__AT5G54680.1 I 0.875
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.875
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.875
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.849
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.859
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.875
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.875
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.875
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.875
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.875
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.872
TCM_031118 Theobroma cacao TCM_031118 I 0.875
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.852
Ca_06956 Cicer arietinum Ca_06956 I 0.875
Ca_16355 Cicer arietinum Ca_16355 I 0.875
Cla001735 Citrullus lanatus Cla001735 I 0.875
Pm029465 Prunus mume Pm029465 I 0.875
28166.m001054 Ricinus communis 28166.m001054 I 0.875
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N 0.844