USF2 (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000012147 T033426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USF2
M04076_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX 		0.914 1.000
USF2
M08050_2.00 		Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN		 ChIP-seq
Mathelier et al.(2014)
MA0526.2 		0.914 1.000
USF2
M07785_2.00 		Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford 		0.914 1.000
USF2
M07786_2.00 		Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford 		0.914 1.000
USF2
M07787_2.00 		Homo sapiens
RGTCACGTGVB
VBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford 		0.914 1.000
USF2
M07788_2.00 		Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford 		0.914 1.000
USF2
M07789_2.00 		Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford 		0.914 1.000
USF2
M08715_2.00 		Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A 		0.914 1.000
USF2
M09812_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_01 		0.914 1.000
USF2
M09813_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_02 		0.914 1.000
USF2
M09814_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6_01 		0.914 1.000
USF2
M09815_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6 		0.914 1.000
USF2
M04077_2.00 		Homo sapiens
VNCAYGTGACN
NGTCACRTGNB		 SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX 		0.914 1.000
Usf2
M01752_2.00 		Mus musculus
NNCACGTGAN
NTCACGTGNN		 PBM
Weirauch et al.(2014)
pTH5265 		0.871 0.981
Usf2
M08777_2.00 		Mus musculus
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_MOUSE.H11MO.0.A 		0.871 0.981
Usf2
M09479_2.00 		Mus musculus
NNCAYGTGVY
RBCACRTGNN		 Misc
Heinz et al.(2010)
C2C12-Usf2_GSE36030 		0.871 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000010920 bHLH 216 271

Links

Other bHLH family TFs
Other Cavia porcellus TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBX Homo sapiens ENSG00000114439 D
Cic Mus musculus ENSMUSG00000005442 D
Bbx Mus musculus ENSMUSG00000022641 D
bbx Drosophila melanogaster FBgn0024251 D
gei-3 Caenorhabditis elegans WBGene00001560 D
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I
WUBG_04884 Wuchereria bancrofti WUBG_04884 I
AAEL004381 Aedes aegypti AAEL004381 I
AAEL011161 Aedes aegypti AAEL011161 I
ACEP13490 Atta cephalotes ACEP13490 I
ACEP18843 Atta cephalotes ACEP18843 I
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I
ADAC008993 Anopheles darlingi ADAC008993 I
ADAC009062 Anopheles darlingi ADAC009062 I
AGAP003896 Anopheles gambiae AGAP003896 I
AGAP003897 Anopheles gambiae AGAP003897 I
AGAP013411 Anopheles gambiae AGAP013411 I
BGIBMGA008274 Bombyx mori BGIBMGA008274 I
BGIBMGA010263 Bombyx mori BGIBMGA010263 I
Bm5934 Brugia malayi Bm5934 I
CapteG223458 Capitella teleta CapteG223458 I
CapteG39110 Capitella teleta CapteG39110 I
CapteG39126 Capitella teleta CapteG39126 I
CBN17413 Caenorhabditis brenneri CBN17413 I
CGI_10015746 Crassostrea gigas CGI_10015746 I
CGI_10018417 Crassostrea gigas CGI_10018417 I
CJA07419 Caenorhabditis japonica CJA07419 I
CPIJ005582 Culex quinquefasciatus CPIJ005582 I
CPIJ012202 Culex quinquefasciatus CPIJ012202 I
CRE24068 Caenorhabditis remanei CRE24068 I
BBX Anolis carolinensis ENSACAG00000006532 I
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I
ENSAMXG00000014362 Astyanax mexicanus ENSAMXG00000014362 I
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I
BBX Bos taurus ENSBTAG00000006893 I
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I
CIC Canis familiaris ENSCAFG00000004858 I
BBX Canis familiaris ENSCAFG00000009867 I
BBX Callithrix jacchus ENSCJAG00000004843 I
CIC Callithrix jacchus ENSCJAG00000012847 I
BBX Cavia porcellus ENSCPOG00000003575 I
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I
bbx Danio rerio ENSDARG00000012699 I
cica Danio rerio ENSDARG00000071150 I
BBX Dasypus novemcinctus ENSDNOG00000013923 I
CIC Dasypus novemcinctus ENSDNOG00000047657 I
Bbx Dipodomys ordii ENSDORG00000008169 I
Cic Dipodomys ordii ENSDORG00000008822 I
CIC Equus caballus ENSECAG00000011342 I
BBX Equus caballus ENSECAG00000023413 I
BBX Erinaceus europaeus ENSEEUG00000014092 I
BBX Echinops telfairi ENSETEG00000005122 I
CIC Echinops telfairi ENSETEG00000017271 I
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I
BBX Felis catus ENSFCAG00000007296 I
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I
CIC Homo sapiens ENSG00000079432 I
cicb Gasterosteus aculeatus ENSGACG00000009452 I
bbx Gasterosteus aculeatus ENSGACG00000020111 I
CIC Gorilla gorilla ENSGGOG00000000192 I
BBX Gorilla gorilla ENSGGOG00000028441 I
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I
BBX Loxodonta africana ENSLAFG00000006362 I
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I
BBX Meleagris gallopavo ENSMGAG00000014384 I
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I
BBX Myotis lucifugus ENSMLUG00000007351 I
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I
BBX Macaca mulatta ENSMMUG00000008787 I
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I
BBX Monodelphis domestica ENSMODG00000001748 I
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I
BBX Ornithorhynchus anatinus ENSOANG00000007497 I
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I
BBX Oryctolagus cuniculus ENSOCUG00000001686 I
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I
CIC Otolemur garnettii ENSOGAG00000003964 I
BBX Otolemur garnettii ENSOGAG00000008056 I
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I
ENSONIG00000004979 Oreochromis niloticus ENSONIG00000004979 I
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I
BBX Ochotona princeps ENSOPRG00000017013 I
bbx Oryzias latipes ENSORLG00000005486 I
cica Oryzias latipes ENSORLG00000007091 I
cicb Oryzias latipes ENSORLG00000013259 I
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I
BBX Procavia capensis ENSPCAG00000013443 I
CIC Procavia capensis ENSPCAG00000017001 I
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I
CIC Pan troglodytes ENSPTRG00000011051 I
BBX Pan troglodytes ENSPTRG00000015187 I
BBX Pteropus vampyrus ENSPVAG00000010534 I
CIC Pteropus vampyrus ENSPVAG00000016806 I
Bbx Rattus norvegicus ENSRNOG00000001971 I
Cic Rattus norvegicus ENSRNOG00000056118 I
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I
CIC Sus scrofa ENSSSCG00000003030 I
BBX Sus scrofa ENSSSCG00000011943 I
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I
CIC Tupaia belangeri ENSTBEG00000009044 I
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I
CIC Tetraodon nigroviridis ENSTNIG00000003521 I
bbx Tetraodon nigroviridis ENSTNIG00000008596 I
bbx Takifugu rubripes ENSTRUG00000003077 I
CIC Takifugu rubripes ENSTRUG00000007193 I
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I
BBX Tursiops truncatus ENSTTRG00000013182 I
CIC Tursiops truncatus ENSTTRG00000013873 I
BBX Vicugna pacos ENSVPAG00000007818 I
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I
GA16961 Drosophila pseudoobscura FBgn0076975 I
GF20922 Drosophila ananassae FBgn0097927 I
GG19727 Drosophila erecta FBgn0111928 I
GI21541 Drosophila mojavensis FBgn0144271 I
GL20955 Drosophila persimilis FBgn0158550 I
GM23082 Drosophila sechellia FBgn0177950 I
GJ16014 Drosophila virilis FBgn0203199 I
GK25081 Drosophila willistoni FBgn0227040 I
GE17925 Drosophila yakuba FBgn0235361 I
GB43462 Apis mellifera GB43462 I
GB48450 Apis mellifera GB48450 I
HMEL012996 Heliconius melpomene HMEL012996 I
ISCW010061 Ixodes scapularis ISCW010061 I
KGM_16790 Danaus plexippus KGM_16790 I
KGM_16941 Danaus plexippus KGM_16941 I
L798_02329 Zootermopsis nevadensis L798_02329 I
L798_08623 Zootermopsis nevadensis L798_08623 I
LOAG_17202 Loa loa LOAG_17202 I
LotgiG89909 Lottia gigantea LotgiG89909 I
MCINX015089 Melitaea cinxia MCINX015089 I
NV10910 Nasonia vitripennis NV10910 I
PHUM079880 Pediculus humanus PHUM079880 I
PHUM230960 Pediculus humanus PHUM230960 I
POSPLDRAFT_104619 Postia placenta POSPLDRAFT_104619 I
POSPLDRAFT_98507 Postia placenta POSPLDRAFT_98507 I
RPRC001090 Rhodnius prolixus RPRC001090 I
SINV12425 Solenopsis invicta SINV12425 I
SMAR009315 Strigamia maritima SMAR009315 I
SMAR012744 Strigamia maritima SMAR012744 I
Smp_142600 Schistosoma mansoni Smp_142600 I
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I
TC004697 Tribolium castaneum TC004697 I
TC007499 Tribolium castaneum TC007499 I
tetur21g00740 Tetranychus urticae tetur21g00740 I
tetur23g01950 Tetranychus urticae tetur23g01950 I
WBGene00241539 Onchocerca volvulus WBGene00241539 I
YQE_03282 Dendroctonus ponderosae YQE_03282 I
YQE_06837 Dendroctonus ponderosae YQE_06837 I
Aan_R014485 Calypte anna Aan_R014485 I
Afo_R006638 Aptenodytes forsteri Afo_R006638 I
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I
Brh_R008020 Buceros rhinoceros Brh_R008020 I
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I
Cflo_04908--XP_624175.2_APIME Camponotus floridanus Cflo_04908--XP_624175.2_APIME I
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I
ENSP00000160740 Macaca fascicularis ENSP00000160740 I
Gfo_R002593 Geospiza fortis Gfo_R002593 I
Hsal_01854--XP_624175.2_APIME Harpegnathos saltator Hsal_01854--XP_624175.2_APIME I
Hsal_08911--XP_624175.2_APIME Harpegnathos saltator Hsal_08911--XP_624175.2_APIME I
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I
Ogr10275 Ophisaurus gracilis Ogr10275 I
Ogr11041 Ophisaurus gracilis Ogr11041 I
Pvit_02469 Pogona vitticeps Pvit_02469 I
Pvit_02876 Pogona vitticeps Pvit_02876 I
Tal_R013114 Tyto alba Tal_R013114 I
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I
CLEC003268 Cimex lectularius CLEC003268 I
HHAL000065-PA Halyomorpha halys HHAL000065-PA I
LDEC000948 Leptinotarsa decemlineata LDEC000948 I
Sjc_0093980 Schistosoma japonicum Sjc_0093980 I
SMU15002098 Schmidtea mediterranea SMU15002098 I
cic Xenopus tropicalis XB-GENE-6467430 I
bbx.L Xenopus laevis XB-GENE-981431 I
XP_002932333 Xenopus tropicalis XP_002932333 I
AALB003439 Anopheles albimanus AALB003439 I
AARA001217 Anopheles arabiensis AARA001217 I
AARA009897 Anopheles arabiensis AARA009897 I
ACHR004909 Anopheles christyi ACHR004909 I
ACHR006446 Anopheles christyi ACHR006446 I
ACOM034716 Anopheles coluzzii ACOM034716 I
ACUA015009 Anopheles culicifacies ACUA015009 I
ADIR003322 Anopheles dirus ADIR003322 I
ADIR003385 Anopheles dirus ADIR003385 I
AEPI004245 Anopheles epiroticus AEPI004245 I
AEPI005675 Anopheles epiroticus AEPI005675 I
AFAF009600 Anopheles farauti AFAF009600 I
AFAF016820 Anopheles farauti AFAF016820 I
AFUN003674 Anopheles funestus AFUN003674 I
AFUN006011 Anopheles funestus AFUN006011 I
AMAM016153 Anopheles maculatus AMAM016153 I
AMAM017484 Anopheles maculatus AMAM017484 I
AMEC010127 Anopheles melas AMEC010127 I
AMEC018835 Anopheles melas AMEC018835 I
AMEM005678 Anopheles merus AMEM005678 I
AMEM012787 Anopheles merus AMEM012787 I
AMIN000258 Anopheles minimus AMIN000258 I
AMIN003810 Anopheles minimus AMIN003810 I
AQUA002577 Anopheles quadriannulatus AQUA002577 I
AQUA008168 Anopheles quadriannulatus AQUA008168 I
ASTEI00261 Anopheles stephensi ASTEI00261 I
ASTEI00827 Anopheles stephensi ASTEI00827 I
ASTEI11145 Anopheles stephensi ASTEI11145 I
BGLB001462 Biomphalaria glabrata BGLB001462 I
BGLB009093 Biomphalaria glabrata BGLB009093 I
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I
MDOA012813 Musca domestica MDOA012813 I
ANCCAN_00149 Ancylostoma caninum ANCCAN_00149 I
ANCCEY_04123 Ancylostoma ceylanicum ANCCEY_04123 I
ANCDUO_05529 Ancylostoma duodenale ANCDUO_05529 I
ASIM_0000334601 Anisakis simplex ASIM_0000334601 I
ASU_10300 Ascaris suum ASU_10300 I
B_00914 Schistosoma haematobium B_00914 I
csin104163 Clonorchis sinensis csin104163 I
D917_02434 Trichinella nativa D917_02434 I
D918_06270 Trichuris suis D918_06270 I
EVEC_0000011601 Enterobius vermicularis EVEC_0000011601 I
Hba_18941 Heterorhabditis bacteriophora Hba_18941 I
L596_g5739 Steinernema carpocapsae L596_g5739 I
L889_g11174 Steinernema feltiae L889_g11174 I
L892_g3879 Steinernema scapterisci L892_g3879 I
L893_g26751 Steinernema glaseri L893_g26751 I
L898_g8837 Steinernema monticolum L898_g8837 I
nAv.1.0.1.g00032 Acanthocheilonema viteae nAv.1.0.1.g00032 I
nDi.2.2.2.g01012 Dirofilaria immitis nDi.2.2.2.g01012 I
nLs.2.1.2.g07996 Litomosoides sigmodontis nLs.2.1.2.g07996 I
nOo.2.0.1.g00287 Onchocerca ochengi nOo.2.0.1.g00287 I
OESDEN_00065 Oesophagostomum dentatum OESDEN_00065 I
OFLC_0001331401 Onchocerca flexuosa OFLC_0001331401 I
PTRK_0000169700 Parastrongyloides trichosuri PTRK_0000169700 I
SBAD_0000026401 Soboliphyme baturini SBAD_0000026401 I
scaffold4-EXSNAP2012.129 Pristionchus exspectatus scaffold4-EXSNAP2012.129 I
SCUD_0001673101 Schistosoma curassoni SCUD_0001673101 I
SMUV_0001072601 Syphacia muris SMUV_0001072601 I
SPAL_0001296500 Strongyloides papillosus SPAL_0001296500 I
SSTP_0000494800 Strongyloides stercoralis SSTP_0000494800 I
SVE_0052600 Strongyloides venezuelensis SVE_0052600 I
SVUK_0000932601 Strongylus vulgaris SVUK_0000932601 I
T265_01499 Opisthorchis viverrini T265_01499 I
TCLT_0000608401 Thelazia callipaeda TCLT_0000608401 I
TMUE_s0223001200 Trichuris muris TMUE_s0223001200 I
TTRE_0000098801 Trichuris trichiura TTRE_0000098801 I