CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD4
(
Dasypus novemcinctus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDNOG00000009650
T033766_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.880
0.885
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.880
0.885
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.880
0.885
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.880
0.885
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.880
0.885
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.880
0.885
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.880
0.885
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.880
0.885
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.845
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.845
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.845
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.845
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.845
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000007470
bHLH
88
140
RRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS
Links
Other
bHLH
family TFs
Other
Dasypus novemcinctus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLIS3
Homo sapiens
ENSG00000107249
D
GLIS1
Taeniopygia guttata
ENSTGUG00000009294
I
SMAR005079
Strigamia maritima
SMAR005079
I
ENSXMAG00000013077
Xiphophorus maculatus
ENSXMAG00000013077
I
ENSXMAG00000005337
Xiphophorus maculatus
ENSXMAG00000005337
I
ENSXMAG00000005013
Xiphophorus maculatus
ENSXMAG00000005013
I
GLIS3
Vicugna pacos
ENSVPAG00000005473
I
ENSTSYG00000000686
Tarsius syrichta
ENSTSYG00000000686
I
ENSTRUG00000001198
Takifugu rubripes
ENSTRUG00000001198
I
GLIS1
Tetraodon nigroviridis
ENSTNIG00000010694
I
Aan_R004053
Calypte anna
Aan_R004053
I
GLIS3
Taeniopygia guttata
ENSTGUG00000005266
I
ENSSTOG00000000302
Ictidomys tridecemlineatus
ENSSTOG00000000302
I
Glis3
Rattus norvegicus
ENSRNOG00000014768
I
GLIS3
Pteropus vampyrus
ENSPVAG00000001839
I
GLIS1
Pan troglodytes
ENSPTRG00000000756
I
ENSPSIG00000005966
Pelodiscus sinensis
ENSPSIG00000005966
I
ENSPSIG00000002846
Pelodiscus sinensis
ENSPSIG00000002846
I
ENSPPYG00000019250
Pongo abelii
ENSPPYG00000019250
I
ENSPFOG00000019805
Poecilia formosa
ENSPFOG00000019805
I
Gfo_R012286
Geospiza fortis
Gfo_R012286
I
glis3
Xenopus tropicalis
XB-GENE-984727
I
Sakowv30037345m.g
Saccoglossus kowalevskii
Sakowv30037345m.g
I
gw.28.157.1
Branchiostoma floridae
gw.28.157.1
I
e_gw.471.22.1
Branchiostoma floridae
e_gw.471.22.1
I
Tal_R012308
Tyto alba
Tal_R012308
I
Pvit_11533
Pogona vitticeps
Pvit_11533
I
Pvit_10484
Pogona vitticeps
Pvit_10484
I
Ogr17806
Ophisaurus gracilis
Ogr17806
I
Myotis_brandtii_GLIS3_10023567
Myotis brandtii
Myotis_brandtii_GLIS3_10023567
I
SPU_018744
Strongylocentrotus purpuratus
SPU_018744
I
Gfo_R010168
Geospiza fortis
Gfo_R010168
I
ENSP00000384734-D2
Bos grunniens
ENSP00000384734-D2
I
ENSP00000371398
Macaca fascicularis
ENSP00000371398
I
Brh_R013214
Buceros rhinoceros
Brh_R013214
I
Afo_R016063
Aptenodytes forsteri
Afo_R016063
I
Afo_R001041
Aptenodytes forsteri
Afo_R001041
I
Aan_R004381
Calypte anna
Aan_R004381
I
ENSPFOG00000002618
Poecilia formosa
ENSPFOG00000002618
I
GLIS1
Cavia porcellus
ENSCPOG00000009497
I
ENSGALG00000010721
Gallus gallus
ENSGALG00000010721
I
GLIS3
Gallus gallus
ENSGALG00000010180
I
GLIS1
Gasterosteus aculeatus
ENSGACG00000012109
I
ENSFALG00000011974
Ficedula albicollis
ENSFALG00000011974
I
ENSFALG00000010519
Ficedula albicollis
ENSFALG00000010519
I
GLIS3
Echinops telfairi
ENSETEG00000015977
I
GLIS3
Equus caballus
ENSECAG00000020544
I
glis1a
Danio rerio
ENSDARG00000068580
I
glis1b
Danio rerio
ENSDARG00000027933
I
ENSLACG00000012147
Latimeria chalumnae
ENSLACG00000012147
I
GLIS3
Cavia porcellus
ENSCPOG00000005523
I
GLIS3
Callithrix jacchus
ENSCJAG00000011083
I
GLIS3
Canis familiaris
ENSCAFG00000031499
I
ENSAPLG00000014844
Anas platyrhynchos
ENSAPLG00000014844
I
ENSAPLG00000013972
Anas platyrhynchos
ENSAPLG00000013972
I
ENSAMXG00000019181
Astyanax mexicanus
ENSAMXG00000019181
I
ENSAMXG00000005278
Astyanax mexicanus
ENSAMXG00000005278
I
GLIS3
Anolis carolinensis
ENSACAG00000003374
I
ENSNLEG00000008824
Nomascus leucogenys
ENSNLEG00000008824
I
DAPPUDRAFT_347217
Daphnia pulex
DAPPUDRAFT_347217
I
GLIS3
Procavia capensis
ENSPCAG00000004139
I
ENSPANG00000025157
Papio anubis
ENSPANG00000025157
I
ENSORLG00000007755
Oryzias latipes
ENSORLG00000007755
I
ENSORLG00000003872
Oryzias latipes
ENSORLG00000003872
I
ENSONIG00000014033
Oreochromis niloticus
ENSONIG00000014033
I
GLIS3
Otolemur garnettii
ENSOGAG00000007376
I
ENSOARG00000013378
Ovis aries
ENSOARG00000013378
I
ENSOANG00000014997
Ornithorhynchus anatinus
ENSOANG00000014997
I
ENSPFOG00000017914
Poecilia formosa
ENSPFOG00000017914
I
Glis3
Mus musculus
ENSMUSG00000052942
I
ENSMPUG00000005095
Mustela putorius furo
ENSMPUG00000005095
I
GLIS3
Monodelphis domestica
ENSMODG00000015403
I
GLIS1
Meleagris gallopavo
ENSMGAG00000011303
I
ENSMEUG00000009882
Macropus eugenii
ENSMEUG00000009882
I
ENSMEUG00000005102
Macropus eugenii
ENSMEUG00000005102
I
ENSLOCG00000012972
Lepisosteus oculatus
ENSLOCG00000012972
I
ENSLOCG00000003071
Lepisosteus oculatus
ENSLOCG00000003071
I