ENSSSCG00000011534 (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000011534 T037424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000012294 bHLH 54 108

Links

Other bHLH family TFs
Other Sus scrofa TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30138.m004071 Ricinus communis 30138.m004071 I 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.000
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
MDP0000819497 Malus domestica MDP0000819497 N 0.000
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N 0.000
30024.m001687 Ricinus communis 30024.m001687 N 0.000
Cla004331 Citrullus lanatus Cla004331 N 0.000
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.000
Bra003088 Brassica rapa Bra003088 N 0.000
Bo9g108730 Brassica oleracea Bo9g108730 N 0.000