CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_60084
(
Neurospora discreta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh3_pm.C_60084
T048418_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.914
0.945
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.858
0.891
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_60084
bHLH
309
383
KKTAHNMIEKRYRTNLNDKIAALKDSVPALRIMSKSARGEDTTEDREELHGLTPAHKLNKATILSKATEYIHHLE
Links
Other
bHLH
family TFs
Other
Neurospora discreta
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
opa
Drosophila melanogaster
FBgn0003002
D
0.000
ref-2
Caenorhabditis elegans
WBGene00004335
D
0.000
WBGene00239980
Onchocerca volvulus
WBGene00239980
I
0.000
SMU15033928
Schmidtea mediterranea
SMU15033928
I
0.000
SMU15031708
Schmidtea mediterranea
SMU15031708
I
0.000
Sakowv30026420m.g
Saccoglossus kowalevskii
Sakowv30026420m.g
I
0.000
Pvit_01334
Pogona vitticeps
Pvit_01334
I
0.000
Ogr17257
Ophisaurus gracilis
Ogr17257
I
0.000
ENSMMUP00000019456
Macaca fascicularis
ENSMMUP00000019456
I
0.000
Cmyd_10016551
Chelonia mydas
Cmyd_10016551
I
0.000
SNAPOd2T00002718001
Oikopleura dioica
SNAPOd2T00002718001
I
0.000
tetur11g00650
Tetranychus urticae
tetur11g00650
I
0.000
TC010234
Tribolium castaneum
TC010234
I
0.000
NV11451
Nasonia vitripennis
NV11451
I
0.000
NEMVEDRAFT_v1g25267
Nematostella vectensis
NEMVEDRAFT_v1g25267
I
0.000
NEMVEDRAFT_v1g121215
Nematostella vectensis
NEMVEDRAFT_v1g121215
I
0.000
GB54250
Apis mellifera
GB54250
I
0.000
GK13239
Drosophila willistoni
FBgn0215248
I
0.000
XP_002153782.1
Hydra magnipapillata
XP_002153782.1
I
0.000
XP_002159358.1
Hydra magnipapillata
XP_002159358.1
I
0.000
MDOA000052
Musca domestica
MDOA000052
I
0.000
ANCCEY_00370
Ancylostoma ceylanicum
ANCCEY_00370
I
0.000
csin109208
Clonorchis sinensis
csin109208
I
0.000
nLs.2.1.2.g02824
Litomosoides sigmodontis
nLs.2.1.2.g02824
I
0.000
nRc.2.0.1.g22468
Romanomermis culicivorax
nRc.2.0.1.g22468
I
0.000
PTRK_0000799900
Parastrongyloides trichosuri
PTRK_0000799900
I
0.000
RSKR_0001155900
Rhabditophanes kr3021
RSKR_0001155900
I
0.000
SPAL_0001746600
Strongyloides papillosus
SPAL_0001746600
I
0.000
SSTP_0000201100
Strongyloides stercoralis
SSTP_0000201100
I
0.000
SVE_0347600
Strongyloides venezuelensis
SVE_0347600
I
0.000
T265_00048
Opisthorchis viverrini
T265_00048
I
0.000
TCLT_0000586501
Thelazia callipaeda
TCLT_0000586501
I
0.000
TMUE_s0101002100
Trichuris muris
TMUE_s0101002100
I
0.000
ENSONIG00000002719
Oreochromis niloticus
ENSONIG00000002719
I
0.000
CGI_10016115
Crassostrea gigas
CGI_10016115
I
0.000
CGI_10016117
Crassostrea gigas
CGI_10016117
I
0.000
CRE00505
Caenorhabditis remanei
CRE00505
I
0.000
DAPPUDRAFT_290567
Daphnia pulex
DAPPUDRAFT_290567
I
0.000
ENSACAG00000003701
Anolis carolinensis
ENSACAG00000003701
I
0.000
ENSAMXG00000000658
Astyanax mexicanus
ENSAMXG00000000658
I
0.000
ENSAMXG00000012318
Astyanax mexicanus
ENSAMXG00000012318
I
0.000
macho1
Ciona intestinalis
ENSCING00000007968
I
0.000
ENSCSAVG00000001907
Ciona savignyi
ENSCSAVG00000001907
I
0.000
zic6
Danio rerio
ENSDARG00000071496
I
0.000
ENSDORG00000012706
Dipodomys ordii
ENSDORG00000012706
I
0.000
ENSGMOG00000004419
Gadus morhua
ENSGMOG00000004419
I
0.000
ZIC1
Monodelphis domestica
ENSMODG00000021251
I
0.000
ENSOANG00000012152
Ornithorhynchus anatinus
ENSOANG00000012152
I
0.000
ZIC5
Oryctolagus cuniculus
ENSOCUG00000026498
I
0.000
AGAP001291
Anopheles gambiae
AGAP001291
I
0.000
ZIC5
Ochotona princeps
ENSOPRG00000007526
I
0.000
ENSPFOG00000012980
Poecilia formosa
ENSPFOG00000012980
I
0.000
ENSPPYG00000005471
Pongo abelii
ENSPPYG00000005471
I
0.000
ENSSHAG00000015025
Sarcophilus harrisii
ENSSHAG00000015025
I
0.000
ZIC5
Sus scrofa
ENSSSCG00000009521
I
0.000
GA10924
Drosophila pseudoobscura
FBgn0070980
I
0.000
GF18915
Drosophila ananassae
FBgn0095929
I
0.000
GG12590
Drosophila erecta
FBgn0104878
I
0.000
GH23039
Drosophila grimshawi
FBgn0130496
I
0.000
GI10245
Drosophila mojavensis
FBgn0133010
I
0.000
GL21621
Drosophila persimilis
FBgn0159214
I
0.000
GM10780
Drosophila sechellia
FBgn0165726
I
0.000
GD19752
Drosophila simulans
FBgn0191241
I
0.000
GJ11051
Drosophila virilis
FBgn0198317
I
0.000