HCOI02168200 (Haemonchus contortus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 HCOI02168200 T054091_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.914 0.942
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.914 0.942
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.914 0.942
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.914 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI02168200.t1 bHLH 137 188
HCOI02168200.t2 bHLH 137 188
HCOI02168200.t3 bHLH 135 186

Links

Other bHLH family TFs
Other Haemonchus contortus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.914
NECAME_14163 Necator americanus NECAME_14163 I 0.914
ASU_01867 Ascaris suum ASU_01867 I 0.914
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.863
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.914
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.914
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.884
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.914
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.914
Bm1750 Brugia malayi Bm1750 I 0.914
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.914
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.914
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.914
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I 0.863
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.884
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.914
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.914
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.914
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.914
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.914
CapteG36721 Capitella teleta CapteG36721 I 0.855
CBG13470 Caenorhabditis briggsae CBG13470 I 0.914
CBN11281 Caenorhabditis brenneri CBN11281 I 0.914
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.855
CJA13327 Caenorhabditis japonica CJA13327 I 0.914
CRE17301 Caenorhabditis remanei CRE17301 I 0.914
LOAG_16988 Loa loa LOAG_16988 I 0.914
Ppa-hlh-1 Pristionchus pacificus PPA08246 I 0.863
TC015855 Tribolium castaneum TC015855 I 0.846
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.914
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.846
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.855
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.846
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.914
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.914
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.914
TELCIR_22290 Teladorsagia circumcincta TELCIR_22290 N 0.741