ATF6B (Sus scrofa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSSCG00000001430 T061409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.883 1.000
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.883 1.000
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.883 1.000
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.883 1.000
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.883 1.000
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.883 1.000
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.883 1.000
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.883 1.000
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.883 1.000
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.832 0.625
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.832 0.625
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.832 0.625
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.832 0.625
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.832 0.625
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.832 0.625
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.832 0.625
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.832 0.625
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.832 0.625
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.832 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000001533 bZIP 323 388
ENSSSCP00000030892 bZIP 320 385

Links

Other bZIP family TFs
Other Sus scrofa TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.000
TCM_002319 Theobroma cacao TCM_002319 N 0.000
TCM_030733 Theobroma cacao TCM_030733 N 0.000
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.000
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.000
Traes_5BL_1E751EF1F Triticum aestivum Traes_5BL_1E751EF1F N 0.000
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.000
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.000
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.000
Pm015021 Prunus mume Pm015021 N 0.000
27613.m000642 Ricinus communis 27613.m000642 N 0.000
Si029418m.g Setaria italica Si029418m.g N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.000
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.000
MDP0000804652 Malus domestica MDP0000804652 N 0.000
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.000
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.000
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.000
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.000
F775_15940 Aegilops tauschii F775_15940 N 0.000
F775_28371 Aegilops tauschii F775_28371 N 0.000
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.000
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.000
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.000
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.000
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.000
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.000
OB07G25870 Oryza brachyantha OB07G25870 N 0.000
OBART07G20130 Oryza barthii OBART07G20130 N 0.000
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.000
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.000
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.000
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.000
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.000
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.000
CIGR2 Oryza sativa OS07G0583600 N 0.000
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.000
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.000
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.000