Carubv10018852m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10018852m.g T071582_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.889 0.952
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.889 0.952
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10018852m bZIP 22 84

Links

Other bZIP family TFs
Other Capsella rubella TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP53 Arabidopsis thaliana AT3G62420 D 0.889
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.825
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.811
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.840
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.782
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.835
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I 0.792
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.889
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.802
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.784
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.802
mgf018581m Mimulus guttatus mgf018581m I 0.816
mgf003466m Mimulus guttatus mgf003466m I 0.802
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.791
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.835
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.791
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.805
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.815
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.783
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.809
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.810
30131.m007078 Ricinus communis 30131.m007078 I 0.809
MDP0000239026 Malus domestica MDP0000239026 I 0.828
PK07533.1 Cannabis sativa PK07533.1 I 0.811
PK03779.1 Cannabis sativa PK03779.1 I 0.793
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.888
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.809
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.802
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.809
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.835
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.792
MDP0000949327 Malus domestica MDP0000949327 I 0.785
MDP0000437680 Malus domestica MDP0000437680 I 0.786
30076.m004659 Ricinus communis 30076.m004659 I 0.811
MDP0000234798 Malus domestica MDP0000234798 I 0.785
MDP0000205823 Malus domestica MDP0000205823 I 0.831
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.792
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.817
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.817
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.794
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.798
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.786
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I 0.785
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.815
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.825
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.793
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.824
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.806
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.795
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.804
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.791
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.812
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.798
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.808
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.825
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.783
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.782
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.809
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.889
Bra039631 Brassica rapa Bra039631 I 0.789
Bra007679 Brassica rapa Bra007679 I 0.879
Bra003500 Brassica rapa Bra003500 I 0.888
Bo8g097830 Brassica oleracea Bo8g097830 I 0.879
Bo6g079450 Brassica oleracea Bo6g079450 I 0.888
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.783
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.783
Cla020641 Citrullus lanatus Cla020641 I 0.791
Cla016841 Citrullus lanatus Cla016841 I 0.825
Ca_03512 Cicer arietinum Ca_03512 I 0.814
Ca_01004 Cicer arietinum Ca_01004 I 0.814
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.825
TCM_004807 Theobroma cacao TCM_004807 I 0.787
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.783
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.802
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.799
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.789
Pm002353 Prunus mume Pm002353 I 0.783
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.798
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.829
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.819
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.809
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.825
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.801
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.802
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.785
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.799