ENSAMXG00000000658 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000000658 T087024_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.775 0.868
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.775 0.868
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.775 0.868
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.775 0.868
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.775 0.868
ref-2
M00621_2.00 		Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG		 PBM
Narasimhan et al.(2015)
pTH9089 		0.762 0.758
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000000700 C2H2 ZF 87 114
ENSAMXP00000000700 C2H2 ZF 120 144
ENSAMXP00000000700 C2H2 ZF 150 174
ENSAMXP00000000700 C2H2 ZF 180 201

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
opa Drosophila melanogaster FBgn0003002 D 0.775
ref-2 Caenorhabditis elegans WBGene00004335 D 0.762
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.771
GD19752 Drosophila simulans FBgn0191241 I 0.775
GJ11051 Drosophila virilis FBgn0198317 I 0.775
GK13239 Drosophila willistoni FBgn0215248 I 0.775
GB54250 Apis mellifera GB54250 I 0.760
KGM_22387 Danaus plexippus KGM_22387 I 0.763
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.779
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.792
NV11451 Nasonia vitripennis NV11451 I 0.760
TC010234 Tribolium castaneum TC010234 I 0.763
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.772
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.758
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.771
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.768
GM10780 Drosophila sechellia FBgn0165726 I 0.775
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.766
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.766
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.757
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.756
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.775
MDOA000052 Musca domestica MDOA000052 I 0.775
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.768
csin109208 Clonorchis sinensis csin109208 I 0.770
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.770
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.761
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.762
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.762
T265_00048 Opisthorchis viverrini T265_00048 I 0.770
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.758
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.772
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.768
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.768
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.777
CRE00505 Caenorhabditis remanei CRE00505 I 0.762
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.763
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.771
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.778
macho1 Ciona intestinalis ENSCING00000007968 I 0.768
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.768
zic6 Danio rerio ENSDARG00000071496 I 0.778
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.768
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.778
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.781
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.771
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.768
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.778
AGAP001291 Anopheles gambiae AGAP001291 I 0.760
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.766
ENSPFOG00000023954 Poecilia formosa ENSPFOG00000023954 I 0.757
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.768
ENSPSIG00000011885 Pelodiscus sinensis ENSPSIG00000011885 I 0.756
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.793
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.768
ENSXMAG00000014868 Xiphophorus maculatus ENSXMAG00000014868 I 0.757
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.775
GF18915 Drosophila ananassae FBgn0095929 I 0.775
GG12590 Drosophila erecta FBgn0104878 I 0.775
GH23039 Drosophila grimshawi FBgn0130496 I 0.775
GI10245 Drosophila mojavensis FBgn0133010 I 0.775
GL21621 Drosophila persimilis FBgn0159214 I 0.775
HelroG77001 Helobdella robusta HelroG77001 N 0.758