ENSPSIG00000011885 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000011885 T107658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ref-2
M00621_2.00 		Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG		 PBM
Narasimhan et al.(2015)
pTH9089 		0.767 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000013216 C2H2 ZF 55 82
ENSPSIP00000013216 C2H2 ZF 88 112
ENSPSIP00000013216 C2H2 ZF 118 142
ENSPSIP00000013216 C2H2 ZF 148 172

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP17 Arabidopsis thaliana AT2G40950 D
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D
29940.m000398 Ricinus communis 29940.m000398 I
Carubv10022722m.g Capsella rubella Carubv10022722m.g I
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I
mgf013640m Mimulus guttatus mgf013640m I
mgf002378m Mimulus guttatus mgf002378m I
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I
Cucsa.337510 Cucumis sativus Cucsa.337510 I
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I
Si029351m.g Setaria italica Si029351m.g I
Pm016493 Prunus mume Pm016493 I
Cla017717 Citrullus lanatus Cla017717 I
Ca_08103 Cicer arietinum Ca_08103 I
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I
TRIUR3_02784 Triticum urartu TRIUR3_02784 I
TRIUR3_00571 Triticum urartu TRIUR3_00571 I
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I
TCM_023889 Theobroma cacao TCM_023889 I
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I
MDP0000299504 Malus domestica MDP0000299504 I
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I
PK07115.1 Cannabis sativa PK07115.1 I
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I
Pavir.J18543 Panicum virgatum Pavir.J18543 I
Pavir.J09096 Panicum virgatum Pavir.J09096 I
Pavir.J00385 Panicum virgatum Pavir.J00385 I
Pavir.Ba00049 Panicum virgatum Pavir.Ba00049 I
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I
MDP0000270677 Malus domestica MDP0000270677 I
MDP0000180785 Malus domestica MDP0000180785 I
MDP0000138811 Malus domestica MDP0000138811 I
Lus10038995.g Linum usitatissimum Lus10038995.g I
Lus10027290.g Linum usitatissimum Lus10027290.g I
Lus10012104.g Linum usitatissimum Lus10012104.g I
Lus10010440.g Linum usitatissimum Lus10010440.g I
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I
GLYMA03G27865 Glycine max GLYMA03G27865 I
OB05G24300 Oryza brachyantha OB05G24300 I
MTR_7g088890 Medicago truncatula MTR_7g088890 I
MLOC_58500 Hordeum vulgare MLOC_58500 I
MLOC_42759 Hordeum vulgare MLOC_42759 I
LPERR07G21050 Leersia perrieri LPERR07G21050 I
LPERR05G13000 Leersia perrieri LPERR05G13000 I
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I
GRMZM2G045236 Zea mays GRMZM2G045236 I
GLYMA19G30681 Glycine max GLYMA19G30681 I
OB07G29670 Oryza brachyantha OB07G29670 I
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I
F775_10026 Aegilops tauschii F775_10026 I
F775_09858 Aegilops tauschii F775_09858 I
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I
BRADI1G19702 Brachypodium distachyon BRADI1G19702 I
Bra016959 Brassica rapa Bra016959 I
Bo4g190610 Brassica oleracea Bo4g190610 I
Bo4g012880 Brassica oleracea Bo4g012880 I
BGIOSGA026248 Oryza indica BGIOSGA026248 I
BGIOSGA018059 Oryza indica BGIOSGA018059 I
BZIP49 Arabidopsis thaliana AT3G56660 I
ORGLA07G0187400 Oryza glaberrima ORGLA07G0187400 I
BZIP17 Arabidopsis lyrata scaffold_402899.1 I
Sb09g020320 Sorghum bicolor Sb09g020320 I
Sb02g041070 Sorghum bicolor Sb02g041070 I
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I
BZIP60 Oryza sativa OS07G0644100 I
BZIP39 Oryza sativa OS05G0411300 I
ORUFI07G25260 Oryza rufipogon ORUFI07G25260 I
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I
Si021442m.g Setaria italica Si021442m.g I
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I
OPUNC07G22690 Oryza punctata OPUNC07G22690 I
OPUNC05G14460 Oryza punctata OPUNC05G14460 I
ONIVA07G23980 Oryza nivara ONIVA07G23980 I
ONIVA05G17010 Oryza nivara ONIVA05G17010 I
OMERI07G20490 Oryza meridionalis OMERI07G20490 I
OLONG_012651 Oryza longistaminata OLONG_012651 I
OGLUM07G24220 Oryza glumaepatula OGLUM07G24220 I
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I
OBART07G24080 Oryza barthii OBART07G24080 I