GM16054 (Drosophila sechellia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0170970 T116058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ken
M06111_2.00 		Drosophila melanogaster
ACTTTCWCY
RGWGAAAGT		 B1H
Zhu et al.(2011)
ken_SANGER_10_FBgn0011236 		0.827 1.000
ken
M06112_2.00 		Drosophila melanogaster
NNRCTTTCWCYNNNN
NNNNRGWGAAAGYNN		 B1H
Zhu et al.(2011)
ken_SOLEXA_5_FBgn0011236 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0197531 C2H2 ZF 494 516
FBpp0197531 C2H2 ZF 522 545
FBpp0197531 C2H2 ZF 561 584

Links

Other C2H2 ZF family TFs
Other Drosophila sechellia TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N
Carubv10019720m.g Capsella rubella Carubv10019720m.g N
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N
mgf025287m Mimulus guttatus mgf025287m N
Cucsa.096030 Cucumis sativus Cucsa.096030 N
Cucsa.036140 Cucumis sativus Cucsa.036140 N
Pavir.J05554 Panicum virgatum Pavir.J05554 N
PK28412.1 Cannabis sativa PK28412.1 N
PK27100.1 Cannabis sativa PK27100.1 N
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N
Pavir.J31170 Panicum virgatum Pavir.J31170 N
cassava11655.m1 Manihot esculenta cassava11655.m1 N
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N
MDP0000394762 Malus domestica MDP0000394762 N
MDP0000197332 Malus domestica MDP0000197332 N
MLOC_75540 Hordeum vulgare MLOC_75540 N
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N
OB08G27840 Oryza brachyantha OB08G27840 N
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N
GLYMA17G11981 Glycine max GLYMA17G11981 N
GLYMA13G22881 Glycine max GLYMA13G22881 N
GLYMA13G22855 Glycine max GLYMA13G22855 N
GLYMA07G03280 Glycine max GLYMA07G03280 N
Bo6g067130 Brassica oleracea Bo6g067130 N
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N
TCM_038144 Theobroma cacao TCM_038144 N
TCM_027266 Theobroma cacao TCM_027266 N
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N
Bo4g107870 Brassica oleracea Bo4g107870 N
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N
Si034159m.g Setaria italica Si034159m.g N
Si000761m.g Setaria italica Si000761m.g N
Si000431m.g Setaria italica Si000431m.g N
Sb02g043380 Sorghum bicolor Sb02g043380 N
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N