MESCA000812 (Megaselia scalaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MESCA000812 T123159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.798 0.935
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.798 0.935
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.798 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MESCA000812-PA C2H2 ZF 323 345
MESCA000812-PA C2H2 ZF 351 373
MESCA000812-PA C2H2 ZF 379 401
MESCA000812-PA C2H2 ZF 407 430

Links

Other C2H2 ZF family TFs
Other Megaselia scalaris TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_008_00025 Aquilegia coerulea Aquca_008_00025 N
PDK_20s1507561g001 Phoenix dactylifera PDK_20s1507561g001 N
SapurV1A.0404s0280 Salix purpurea SapurV1A.0404s0280 N
orange1.1g009215m.g Citrus sinensis orange1.1g009215m.g N
Lus10031748.g Linum usitatissimum Lus10031748.g N
Gorai.002G110100 Gossypium raimondii Gorai.002G110100 N
gene18499-v1.0-hybrid Fragaria vesca gene18499-v1.0-hybrid N
evm.TU.supercontig_34.30 Carica papaya evm.TU.supercontig_34.30 N
Eucgr.F04460 Eucalyptus grandis Eucgr.F04460 N
Ciclev10004715m.g Citrus clementina Ciclev10004715m.g N
AMTR_s00004p00270570 Amborella trichopoda AMTR_s00004p00270570 N
cassava20476.m1 Manihot esculenta cassava20476.m1 N
30169.m006306 Ricinus communis 30169.m006306 N
Pm011106 Prunus mume Pm011106 N
Ca_23936 Cicer arietinum Ca_23936 N
VIT_19s0085g00540 Vitis vinifera VIT_19s0085g00540 N
TCM_033446 Theobroma cacao TCM_033446 N
POPTR_0005s09790 Populus trichocarpa POPTR_0005s09790 N
MTR_8g442410 Medicago truncatula MTR_8g442410 N
GLYMA15G28410 Glycine max GLYMA15G28410 N