Traes_5BL_9C687EE11 (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Traes_5BL_9C687EE11 T130612_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.784 0.739
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.784 0.739
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.783 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5BL_9C687EE11.5 C2H2 ZF 55 82
Traes_5BL_9C687EE11.5 C2H2 ZF 105 127

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB15 Arabidopsis thaliana AT3G23250 D
WER Arabidopsis thaliana AT5G14750 D
MYB59 Arabidopsis thaliana AT5G59780 D
MYB3 Arabidopsis thaliana AT1G22640 D
Si026803m.g Setaria italica Si026803m.g I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
Pavir.J33560 Panicum virgatum Pavir.J33560 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I
Pavir.J08441 Panicum virgatum Pavir.J08441 I
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Si023104m.g Setaria italica Si023104m.g I
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Cucsa.213500 Cucumis sativus Cucsa.213500 I
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
MTR_2g096380 Medicago truncatula MTR_2g096380 I
MLOC_78504 Hordeum vulgare MLOC_78504 I
MLOC_52439 Hordeum vulgare MLOC_52439 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G048136 Zea mays GRMZM2G048136 I
GLYMA15G04620 Glycine max GLYMA15G04620 I
GLYMA13G40830 Glycine max GLYMA13G40830 I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
MTR_4g063100 Medicago truncatula MTR_4g063100 I
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N
MDP0000581761 Malus domestica MDP0000581761 N
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N
Ciclev10009700m.g Citrus clementina Ciclev10009700m.g N
Ciclev10006469m.g Citrus clementina Ciclev10006469m.g N
PK22178.1 Cannabis sativa PK22178.1 N
Carubv10027237m.g Capsella rubella Carubv10027237m.g N
Carubv10020983m.g Capsella rubella Carubv10020983m.g N
LjT39N06.160.nd Lotus japonicus LjT39N06.160.nd N
PK18646.1 Cannabis sativa PK18646.1 N
PK16488.1 Cannabis sativa PK16488.1 N
PK07876.1 Cannabis sativa PK07876.1 N
Lus10040861.g Linum usitatissimum Lus10040861.g N
orange1.1g031483m.g Citrus sinensis orange1.1g031483m.g N
Thhalv10022197m.g Eutrema salsugineum Thhalv10022197m.g N
Thhalv10019036m.g Eutrema salsugineum Thhalv10019036m.g N
TRIUR3_12584 Triticum urartu TRIUR3_12584 N
SapurV1A.2099s0020 Salix purpurea SapurV1A.2099s0020 N
SapurV1A.2154s0020 Salix purpurea SapurV1A.2154s0020 N
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N
ATMYBL2 Arabidopsis thaliana AT1G71030 N
BGIOSGA002691 Oryza indica BGIOSGA002691 N
Bo2g070770 Brassica oleracea Bo2g070770 N
Bo6g112670 Brassica oleracea Bo6g112670 N
Bra007957 Brassica rapa Bra007957 N
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N
ATMYBL2 Arabidopsis lyrata fgenesh2_kg.2__1365__AT1G71030.1 N
GLYMA03G41965 Glycine max GLYMA03G41965 N
OBART01G01770 Oryza barthii OBART01G01770 N
OBART01G27550 Oryza barthii OBART01G27550 N
OGLUM01G01950 Oryza glumaepatula OGLUM01G01950 N
OMERI01G01270 Oryza meridionalis OMERI01G01270 N
ONIVA01G01950 Oryza nivara ONIVA01G01950 N
OPUNC01G01540 Oryza punctata OPUNC01G01540 N
OS01G0127450 Oryza sativa OS01G0127450 N
Cagra.0147s0041 Capsella grandiflora Cagra.0147s0041 N
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N
Sb05g027370 Sorghum bicolor Sb05g027370 N
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N
Traes_6BL_931C25F08 Triticum aestivum Traes_6BL_931C25F08 N
Ca_16710 Cicer arietinum Ca_16710 N
30072.m000986 Ricinus communis 30072.m000986 N
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N
mgf018170m Mimulus guttatus mgf018170m N
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N
Bostr.10273s0244 Boechera stricta Bostr.10273s0244 N