Ocbimv22006209m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22006209m.g T140582_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22006209m.p C2H2 ZF 3 22
Ocbimv22006209m.p C2H2 ZF 56 78
Ocbimv22006209m.p C2H2 ZF 84 106
Ocbimv22006209m.p C2H2 ZF 112 134
Ocbimv22006209m.p C2H2 ZF 140 162
Ocbimv22006209m.p C2H2 ZF 168 190
Ocbimv22006209m.p C2H2 ZF 196 218
Ocbimv22006209m.p C2H2 ZF 224 246
Ocbimv22006209m.p C2H2 ZF 252 274
Ocbimv22006209m.p C2H2 ZF 280 302
Ocbimv22006210m.p C2H2 ZF 3 22
Ocbimv22006210m.p C2H2 ZF 56 78
Ocbimv22006210m.p C2H2 ZF 84 106
Ocbimv22006210m.p C2H2 ZF 112 134
Ocbimv22006210m.p C2H2 ZF 140 162
Ocbimv22006210m.p C2H2 ZF 168 190
Ocbimv22006210m.p C2H2 ZF 196 218
Ocbimv22006210m.p C2H2 ZF 224 246
Ocbimv22006210m.p C2H2 ZF 252 274
Ocbimv22006210m.p C2H2 ZF 280 302

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G10030 Arabidopsis thaliana AT3G10030 D
PK04914.1 Cannabis sativa PK04914.1 D
Carubv10015256m.g Capsella rubella Carubv10015256m.g I
TRIUR3_22240 Triticum urartu TRIUR3_22240 I
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I
Ca_20148 Cicer arietinum Ca_20148 I
Cla018015 Citrullus lanatus Cla018015 I
Pm026265 Prunus mume Pm026265 I
28077.m000081 Ricinus communis 28077.m000081 I
29815.m000504 Ricinus communis 29815.m000504 I
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I
Cucsa.378670 Cucumis sativus Cucsa.378670 I
mgf008067m Mimulus guttatus mgf008067m I
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I
MDP0000201016 Malus domestica MDP0000201016 I
MDP0000399495 Malus domestica MDP0000399495 I
MDP0000415733 Malus domestica MDP0000415733 I
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I
Pavir.J13370 Panicum virgatum Pavir.J13370 I
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I
OB04G18670 Oryza brachyantha OB04G18670 I
Bo5g137800 Brassica oleracea Bo5g137800 I
Bra029812 Brassica rapa Bra029812 I
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I
F775_31501 Aegilops tauschii F775_31501 I
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I
GLYMA10G07490 Glycine max GLYMA10G07490 I
GLYMA10G34520 Glycine max GLYMA10G34520 I
GLYMA13G21371 Glycine max GLYMA13G21371 I
GLYMA20G33031 Glycine max GLYMA20G33031 I
GRMZM2G002978 Zea mays GRMZM2G002978 I
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I
LPERR04G08300 Leersia perrieri LPERR04G08300 I
MLOC_28975 Hordeum vulgare MLOC_28975 I
MTR_1g061600 Medicago truncatula MTR_1g061600 I
BGIOSGA016339 Oryza indica BGIOSGA016339 I
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I
OMERI04G10080 Oryza meridionalis OMERI04G10080 I
ONIVA04G09510 Oryza nivara ONIVA04G09510 I
OPUNC04G09570 Oryza punctata OPUNC04G09570 I
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I
Sb06g015280 Sorghum bicolor Sb06g015280 I
Si009787m.g Setaria italica Si009787m.g I
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I
TCM_022397 Theobroma cacao TCM_022397 I
TCM_043551 Theobroma cacao TCM_043551 I
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I