OESDEN_04286 (Oesophagostomum dentatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 OESDEN_04286 T155543_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pag-3
M00619_2.00 		Caenorhabditis elegans
NVAATCWSNN
NNSWGATTBN		 PBM
Narasimhan et al.(2015)
pTH9969 		0.793 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OESDEN_04286 C2H2 ZF 58 80
OESDEN_04286 C2H2 ZF 86 108
OESDEN_04286 C2H2 ZF 114 136
OESDEN_04286 C2H2 ZF 142 164
OESDEN_04286 C2H2 ZF 170 193

Links

Other C2H2 ZF family TFs
Other Oesophagostomum dentatum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG20858 Caenorhabditis briggsae CBG20858 I
HCOI02134900 Haemonchus contortus HCOI02134900 I
HPLM_0001751701 Haemonchus placei HPLM_0001751701 I
Minc10867 Meloidogyne incognita Minc10867 N
genemark-nMf.1.1.scaf07203-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf07203-processed-gene-0.2 N
GPLIN_000491400 Globodera pallida GPLIN_000491400 N
L596_g1056 Steinernema carpocapsae L596_g1056 N
L889_g5312 Steinernema feltiae L889_g5312 N
L892_g27545 Steinernema scapterisci L892_g27545 N
L893_g33788 Steinernema glaseri L893_g33788 N
L898_g16521 Steinernema monticolum L898_g16521 N
MhA1_Contig800.frz3.gene8 Meloidogyne hapla MhA1_Contig800.frz3.gene8 N
RSKR_0000405100 Rhabditophanes kr3021 RSKR_0000405100 N
SPAL_0000254800 Strongyloides papillosus SPAL_0000254800 N
SSTP_0000526000 Strongyloides stercoralis SSTP_0000526000 N
SVE_0255600 Strongyloides venezuelensis SVE_0255600 N