CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g121700
(
Brassica oleracea
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Bo4g121700
T159789_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g121700.1
CBF/NF-Y
8
33
LLQQPYLHESRHVHALKRPRGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS04G0460600
Oryza sativa
OS04G0460600
I
OGLUM02G22030
Oryza glumaepatula
OGLUM02G22030
I
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
OLONG_023103
Oryza longistaminata
OLONG_023103
I
OMERI02G21390
Oryza meridionalis
OMERI02G21390
I
ONIVA02G24080
Oryza nivara
ONIVA02G24080
I
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
ORUFI02G22930
Oryza rufipogon
ORUFI02G22930
I
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
OS02G0579000
Oryza sativa
OS02G0579000
I
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
OS08G0511200
Oryza sativa
OS08G0511200
I
Sb06g019010
Sorghum bicolor
Sb06g019010
I
Sb07g005610
Sorghum bicolor
Sb07g005610
I
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
Si010553m.g
Setaria italica
Si010553m.g
I
Si010680m.g
Setaria italica
Si010680m.g
I
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
GRMZM2G139700
Zea mays
GRMZM2G139700
I
F775_20638
Aegilops tauschii
F775_20638
I
BRADI3G46900
Brachypodium distachyon
BRADI3G46900
I
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
MLOC_13932
Hordeum vulgare
MLOC_13932
I
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
GRMZM2G167018
Zea mays
GRMZM2G167018
I
MLOC_65286
Hordeum vulgare
MLOC_65286
I
GRMZM2G063522
Zea mays
GRMZM2G063522
I
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
GRMZM2G009892
Zea mays
GRMZM2G009892
I
F775_30297
Aegilops tauschii
F775_30297
I
BGIOSGA008492
Oryza indica
BGIOSGA008492
I
OBART02G21850
Oryza barthii
OBART02G21850
I
OBART04G14970
Oryza barthii
OBART04G14970
I
Si014180m.g
Setaria italica
Si014180m.g
N
GLYMA08G18470
Glycine max
GLYMA08G18470
N
Si017567m.g
Setaria italica
Si017567m.g
N
Traes_2AL_CA89051FD
Triticum aestivum
Traes_2AL_CA89051FD
N
F775_26920
Aegilops tauschii
F775_26920
N
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
TRIUR3_34020
Triticum urartu
TRIUR3_34020
N
Ca_13537
Cicer arietinum
Ca_13537
N
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
BGIOSGA023457
Oryza indica
BGIOSGA023457
N
OBART04G25950
Oryza barthii
OBART04G25950
N
ORGLA04G0226100
Oryza glaberrima
ORGLA04G0226100
N
OBART06G24550
Oryza barthii
OBART06G24550
N
OGLUM06G25850
Oryza glumaepatula
OGLUM06G25850
N
OB02G29280
Oryza brachyantha
OB02G29280
N
OLONG_010248
Oryza longistaminata
OLONG_010248
N
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
OMERI04G21180
Oryza meridionalis
OMERI04G21180
N
OMERI06G24740
Oryza meridionalis
OMERI06G24740
N
ONIVA02G35380
Oryza nivara
ONIVA02G35380
N
MLOC_53744
Hordeum vulgare
MLOC_53744
N
MLOC_25708
Hordeum vulgare
MLOC_25708
N
OPUNC06G22270
Oryza punctata
OPUNC06G22270
N
Si006975m.g
Setaria italica
Si006975m.g
N
ORGLA06G0205600
Oryza glaberrima
ORGLA06G0205600
N
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
ORUFI06G26420
Oryza rufipogon
ORUFI06G26420
N
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
GRMZM5G898290
Zea mays
GRMZM5G898290
N
OS06G0675600
Oryza sativa
OS06G0675600
N
Sb10g027100
Sorghum bicolor
Sb10g027100
N
GLYMA15G40510
Glycine max
GLYMA15G40510
N