rbpja (Gasterosteus aculeatus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSGACG00000015888 T166062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.891 0.891
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.891 0.891
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.891 0.891
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.891 0.891
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.891 0.891
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.891 0.891
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.891 0.891
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.891 0.891
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.891 0.891
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.891 0.891
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.891 0.891
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.891 0.891
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.891 0.891
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.760 0.760
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000020967 CSL 37 167

Links

Other CSL family TFs
Other Gasterosteus aculeatus TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBPJ Homo sapiens ENSG00000168214 D 1.000
Rbpj Mus musculus ENSMUSG00000039191 D 0.891
Su(H) Drosophila melanogaster FBgn0004837 D 0.760
AAEL006419 Aedes aegypti AAEL006419 I 0.729
ACEP17167 Atta cephalotes ACEP17167 I 0.775
AGAP008935 Anopheles gambiae AGAP008935 I 0.736
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.798
CapteG179039 Capitella teleta CapteG179039 I 0.767
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.748
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.729
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.891
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.891
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.885
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.922
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.885
RBPJ Bos taurus ENSBTAG00000003602 I 0.891
RBPJ Canis familiaris ENSCAFG00000016387 I 0.891
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.891
su(h) Ciona intestinalis ENSCING00000000838 I 0.723
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.891
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.835
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.736
rbpja Danio rerio ENSDARG00000003398 I 0.915
rbpjb Danio rerio ENSDARG00000052091 I 0.899
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.891
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.891
RBPJ Equus caballus ENSECAG00000019257 I 0.891
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.891
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.885
RBPJ Felis catus ENSFCAG00000030363 I 0.854
RBPJ Gallus gallus ENSGALG00000014365 I 0.885
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.891
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.938
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.926
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.891
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.891
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.891
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.876
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.891
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.891
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.884
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.891
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.891
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.891
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.891
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.891
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.891
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.953
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.863
rbpja Oryzias latipes ENSORLG00000004882 I 0.899
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.721
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.891
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.870
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.837
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.891
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.752
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.891
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.891
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.891
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.837
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.891
RBPJ Sorex araneus ENSSARG00000001169 I 0.891
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.884
RBPJ Sus scrofa ENSSSCG00000022155 I 0.891
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.891
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.891
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.885
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.870
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.878
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.891
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.891
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.904
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.870
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.853
Su(H) Drosophila simulans FBgn0027417 I 0.760
GF14905 Drosophila ananassae FBgn0091930 I 0.760
GG25142 Drosophila erecta FBgn0117267 I 0.760
GH10915 Drosophila grimshawi FBgn0118396 I 0.760
GI13259 Drosophila mojavensis FBgn0136016 I 0.752
GL26026 Drosophila persimilis FBgn0163608 I 0.760
GM15894 Drosophila sechellia FBgn0170810 I 0.760
GJ11880 Drosophila virilis FBgn0199134 I 0.760
GE20814 Drosophila yakuba FBgn0238107 I 0.760
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.760
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.760
GB45655 Apis mellifera GB45655 I 0.775
HMEL017244 Heliconius melpomene HMEL017244 I 0.791
ISCW010197 Ixodes scapularis ISCW010197 I 0.736
KGM_08407 Danaus plexippus KGM_08407 I 0.791
L798_15068 Zootermopsis nevadensis L798_15068 I 0.791
LotgiG159505 Lottia gigantea LotgiG159505 I 0.775
MESCA005881 Megaselia scalaris MESCA005881 I 0.735
NV17858 Nasonia vitripennis NV17858 I 0.783
NV17967 Nasonia vitripennis NV17967 I 0.713
PHUM462870 Pediculus humanus PHUM462870 I 0.760
SINV15808 Solenopsis invicta SINV15808 I 0.775
SMAR001432 Strigamia maritima SMAR001432 I 0.775
TC014468 Tribolium castaneum TC014468 I 0.767
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.752
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.752
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.767
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.754
Aan_R011115 Calypte anna Aan_R011115 I 0.885
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.885
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.891
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.885
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.775
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.891
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.891
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.891
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.885
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.767
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.891
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.856
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.891
Tal_R001466 Tyto alba Tal_R001466 I 0.885
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.798
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.779
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.763
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.767
AAB05479 Xenopus laevis AAB05479 I 0.885
CLEC005205 Cimex lectularius CLEC005205 I 0.760
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.769
LCUP003485 Lucilia cuprina LCUP003485 I 0.740
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.767
rbpj Xenopus tropicalis XB-GENE-490756 I 0.891
rbpj.S Xenopus laevis XB-GENE-865998 I 0.885
AALB007981 Anopheles albimanus AALB007981 I 0.736
AATE009298 Anopheles atroparvus AATE009298 I 0.736
ACOM040639 Anopheles coluzzii ACOM040639 I 0.736
ACUA014515 Anopheles culicifacies ACUA014515 I 0.736
ADIR011431 Anopheles dirus ADIR011431 I 0.736
AFAF012186 Anopheles farauti AFAF012186 I 0.736
AFUN007280 Anopheles funestus AFUN007280 I 0.736
AMEM004324 Anopheles merus AMEM004324 I 0.736
AMIN005880 Anopheles minimus AMIN005880 I 0.736
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.726
ASIS021327 Anopheles sinensis ASIS021327 I 0.720
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.729
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.713
MDOA002342 Musca domestica MDOA002342 I 0.740
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
NECAME_17145 Necator americanus NECAME_17145 I 0.714
NEMVEDRAFT_v1g206550 Nematostella vectensis NEMVEDRAFT_v1g206550 N 0.705