EFV60976 (Trichinella spiralis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 EFV60976 T185063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.780 0.852
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.780 0.852
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.780 0.852
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.780 0.852
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.780 0.852
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.780 0.852
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.780 0.852
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.780 0.852
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.780 0.852
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.780 0.852
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.773 0.840
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.773 0.840
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.773 0.840
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.773 0.840
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.773 0.840
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.697 0.741
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.697 0.741
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.697 0.741
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.697 0.741
HCM1
M00044_2.00 		Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN		 PBM
Badis et al.(2008)
HCM1_2157 		0.670 0.481
HCM1
M07473_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1 		0.670 0.481
HCM1
M08554_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 Misc
DeBoer et al.(2011)
YCR065W_570 		0.670 0.481
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV60976 Forkhead 597 680

Links

Other Forkhead family TFs
Other Trichinella spiralis TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N
ETC1 Arabidopsis thaliana AT1G01380 N
TCL2 Arabidopsis thaliana AT2G30424 N
TCL1 Arabidopsis thaliana AT2G30432 N
CPC Arabidopsis thaliana AT2G46410 N
ETC3 Arabidopsis thaliana AT4G01060 N
TRY Arabidopsis thaliana AT5G53200 N
Bo2g046050 Brassica oleracea Bo2g046050 N
Bo2g098940 Brassica oleracea Bo2g098940 N
Bo3g022870 Brassica oleracea Bo3g022870 N
Bo3g024610 Brassica oleracea Bo3g024610 N
Bo3g039260 Brassica oleracea Bo3g039260 N
Bo3g054440 Brassica oleracea Bo3g054440 N
Bo4g009260 Brassica oleracea Bo4g009260 N
Bo4g197120 Brassica oleracea Bo4g197120 N
Bo9g110930 Brassica oleracea Bo9g110930 N
Bra000941 Brassica rapa Bra000941 N
Bra004539 Brassica rapa Bra004539 N
Bra008539 Brassica rapa Bra008539 N
Bra022637 Brassica rapa Bra022637 N
Bra026297 Brassica rapa Bra026297 N
Bra039283 Brassica rapa Bra039283 N
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N
GLYMA01G43435 Glycine max GLYMA01G43435 N
GLYMA11G02061 Glycine max GLYMA11G02061 N
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N
MTR_5g009460 Medicago truncatula MTR_5g009460 N
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N
TCL2 Arabidopsis lyrata scaffold_401531.1 N
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N
TCM_005177 Theobroma cacao TCM_005177 N
TCM_015351 Theobroma cacao TCM_015351 N
TCM_016428 Theobroma cacao TCM_016428 N
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N
Ca_15029 Cicer arietinum Ca_15029 N
Cla011563 Citrullus lanatus Cla011563 N
Pm018400 Prunus mume Pm018400 N
Pm019781 Prunus mume Pm019781 N
29742.m001447 Ricinus communis 29742.m001447 N
30169.m006531 Ricinus communis 30169.m006531 N
cassava10382.m1 Manihot esculenta cassava10382.m1 N
cassava32987.m1 Manihot esculenta cassava32987.m1 N
cassava46504.m1 Manihot esculenta cassava46504.m1 N
Cucsa.201970 Cucumis sativus Cucsa.201970 N
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N
Cagra.0483s0079 Capsella grandiflora Cagra.0483s0079 N
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N
Carubv10003403m.g Capsella rubella Carubv10003403m.g N
Carubv10011382m.g Capsella rubella Carubv10011382m.g N
Carubv10018233m.g Capsella rubella Carubv10018233m.g N
Carubv10024393m.g Capsella rubella Carubv10024393m.g N
Carubv10024406m.g Capsella rubella Carubv10024406m.g N
Carubv10024964m.g Capsella rubella Carubv10024964m.g N
Carubv10025583m.g Capsella rubella Carubv10025583m.g N
Carubv10027412m.g Capsella rubella Carubv10027412m.g N
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N
Lus10005949.g Linum usitatissimum Lus10005949.g N
Lus10014933.g Linum usitatissimum Lus10014933.g N
Lus10038822.g Linum usitatissimum Lus10038822.g N
MDP0000141474 Malus domestica MDP0000141474 N
MDP0000547418 Malus domestica MDP0000547418 N
MDP0000718806 Malus domestica MDP0000718806 N
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N