ENSLOCG00000014427 (Lepisosteus oculatus)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSLOCG00000014427 T186098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.816 0.852
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.816 0.852
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.816 0.852
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.816 0.852
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.816 0.852
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.816 0.852
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.816 0.852
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.816 0.852
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.816 0.852
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.816 0.852
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.742 0.679
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.742 0.679
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.742 0.679
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.742 0.679
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.740 0.765
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.740 0.765
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.740 0.765
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.740 0.765
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.740 0.765
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.697 0.494
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.697 0.494
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.697 0.494
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.697 0.494
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.697 0.494
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.697 0.494
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.697 0.494
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.696 0.494
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.696 0.494
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.696 0.494
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.696 0.494
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.696 0.494
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.696 0.494
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.696 0.494
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.696 0.494
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.683 0.481
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.683 0.469
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.683 0.469
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.683 0.469
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.683 0.469
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.683 0.469
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.683 0.469
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.683 0.469
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.683 0.469
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.683 0.469
FOXK2
M08118_2.00 		Homo sapiens
NNRTAAACANN
NNTGTTTAYNN		 ChIP-seq
Mathelier et al.(2014)
MA1103.1 		0.682 0.432
foxg1a
M01985_2.00 		Oryzias latipes
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6729 		0.675 0.494
Foxl1
M00164_2.00 		Mus musculus
NNNRTMAAYA
TRTTKAYNNN		 PBM
Badis et al.(2009)
Foxl1_2809 		0.672 0.444
FOXL1
M03034_2.00 		Homo sapiens
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
FOXL1_1 		0.672 0.444
FOXL1
M03035_2.00 		Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN		 SELEX
Jolma et al.(2013)
FOXL1_2 		0.672 0.444
FOXL1
M10558_2.00 		Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH		 Transfac
Matys et al.(2006)
V$FREAC7_01 		0.672 0.444
daf-16
M01989_2.00 		Caenorhabditis elegans
NNRWMAAYAN
NTRTTKWYNN		 PBM
Weirauch et al.(2014)
pTH8995 		0.669 0.432
FOXG1
M01978_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5501 		0.669 0.494
Foxg1
M00791_2.00 		Mus musculus
NNNNMHAYAN
NTRTDKNNNN		 PBM
Weirauch et al.(2013)
pTH2846 		0.669 0.494
FOXG1
M03032_2.00 		Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY		 SELEX
Jolma et al.(2013)
FOXG1_1 		0.669 0.494
FOXG1
M03033_2.00 		Homo sapiens
RCGGACACAATR
YATTGTGTCCGY		 SELEX
Jolma et al.(2013)
FOXG1_2 		0.669 0.494
Foxg1
M03052_2.00 		Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT		 SELEX
Jolma et al.(2013)
Foxg1_1 		0.669 0.494
Foxg1
M03053_2.00 		Mus musculus
MHGGACACAATC
GATTGTGTCCDK		 SELEX
Jolma et al.(2013)
Foxg1_2 		0.669 0.494
Foxg1
M03054_2.00 		Mus musculus
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
Foxg1_3 		0.669 0.494
FOXG1
M04839_2.00 		Homo sapiens
NACRYMMACAH
DTGTKKRYGTN		 SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX 		0.669 0.494
FOXG1
M04840_2.00 		Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD		 SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX 		0.669 0.494
Foxj2
M00790_2.00 		Mus musculus
VHMAAYANN
NNTRTTKDB		 PBM
Weirauch et al.(2013)
pTH3043 		0.665 0.481
FOXJ2
M03016_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_1 		0.665 0.481
FOXJ2
M03017_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 SELEX
Jolma et al.(2013)
FOXJ2_2 		0.665 0.481
FOXJ2
M03018_2.00 		Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_3 		0.665 0.481
FOXJ2
M04809_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX 		0.665 0.481
FOXJ2
M09084_2.00 		Homo sapiens
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C 		0.665 0.481
Foxj2
M09100_2.00 		Mus musculus
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C 		0.665 0.481
FOXJ2
M10527_2.00 		Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD		 Transfac
Matys et al.(2006)
V$FOXJ2_01 		0.665 0.481
FOXJ2
M10528_2.00 		Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB		 Transfac
Matys et al.(2006)
V$FOXJ2_02 		0.665 0.481
FOXJ2
M04810_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX 		0.665 0.481
NCU06173
M01992_2.00 		Neurospora crassa
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH8896 		0.665 0.407
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000017761 Forkhead 350 434
ENSLOCP00000017765 Forkhead 338 422

Links

Other Forkhead family TFs
Other Lepisosteus oculatus TFs

990 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC087 Arabidopsis thaliana AT5G18270 D
TRIUR3_35152 Triticum urartu TRIUR3_35152 I
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I
Cucsa.002980 Cucumis sativus Cucsa.002980 I
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I
cassava25877.m1 Manihot esculenta cassava25877.m1 I
29950.m001171 Ricinus communis 29950.m001171 I
Cla012339 Citrullus lanatus Cla012339 I
Ca_08255 Cicer arietinum Ca_08255 I
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I
Carubv10001373m.g Capsella rubella Carubv10001373m.g I
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I
TCM_026028 Theobroma cacao TCM_026028 I
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I
OS01G0104500 Oryza sativa OS01G0104500 I
Pavir.Ib01526 Panicum virgatum Pavir.Ib01526 I
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I
Pavir.J39049 Panicum virgatum Pavir.J39049 I
Pavir.J21394 Panicum virgatum Pavir.J21394 I
Pavir.J13094 Panicum virgatum Pavir.J13094 I
POPTR_0013s05110 Populus trichocarpa POPTR_0013s05110 I
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I
GLYMA16G04720 Glycine max GLYMA16G04720 I
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I
LPERR01G00270 Leersia perrieri LPERR01G00270 I
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I
OB01G10300 Oryza brachyantha OB01G10300 I
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I
GRMZM2G159500 Zea mays GRMZM2G159500 I
GRMZM2G031001 Zea mays GRMZM2G031001 I
GLYMA19G28515 Glycine max GLYMA19G28515 I
GLYMA16G26810 Glycine max GLYMA16G26810 I
GLYMA02G07760 Glycine max GLYMA02G07760 I
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I
F775_29256 Aegilops tauschii F775_29256 I
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I
Bra023669 Brassica rapa Bra023669 I
OPUNC01G00320 Oryza punctata OPUNC01G00320 I
Bra006449 Brassica rapa Bra006449 I
Bo3g013050 Brassica oleracea Bo3g013050 I
Bo2g015440 Brassica oleracea Bo2g015440 I
BGIOSGA010816 Oryza indica BGIOSGA010816 N
F775_26964 Aegilops tauschii F775_26964 N
F775_15511 Aegilops tauschii F775_15511 N
ORGLA03G0152400 Oryza glaberrima ORGLA03G0152400 N
OLONG_022063 Oryza longistaminata OLONG_022063 N
ORUFI03G16480 Oryza rufipogon ORUFI03G16480 N
OPUNC07G25090 Oryza punctata OPUNC07G25090 N
OS03G0327100 Oryza sativa OS03G0327100 N
OPUNC03G15440 Oryza punctata OPUNC03G15440 N
ONIVA03G16900 Oryza nivara ONIVA03G16900 N
Sb02g043270 Sorghum bicolor Sb02g043270 N
Si035639m.g Setaria italica Si035639m.g N
OMERI03G14250 Oryza meridionalis OMERI03G14250 N
Traes_2AS_7AAACC26B Triticum aestivum Traes_2AS_7AAACC26B N
Traes_2BS_00566A85C Triticum aestivum Traes_2BS_00566A85C N
LPERR03G13930 Leersia perrieri LPERR03G13930 N
OGLUM03G16080 Oryza glumaepatula OGLUM03G16080 N
OBART03G15920 Oryza barthii OBART03G15920 N
OB07G32150 Oryza brachyantha OB07G32150 N
Traes_5BL_420974D47 Triticum aestivum Traes_5BL_420974D47 N
TRIUR3_14541 Triticum urartu TRIUR3_14541 N
TRIUR3_20284 Triticum urartu TRIUR3_20284 N
MLOC_65400 Hordeum vulgare MLOC_65400 N
MLOC_64057 Hordeum vulgare MLOC_64057 N
MLOC_5832 Hordeum vulgare MLOC_5832 N