Bo1g108240 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo1g108240 T191874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.856 0.944
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.847 0.889
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.847 0.889
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.847 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g108240.1 GATA 216 253

Links

Other GATA family TFs
Other Brassica oleracea TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HDG7 Arabidopsis thaliana AT5G52170 D
LYS14 Saccharomyces cerevisiae YDR034C D
AMTR_s00048p00089530 Amborella trichopoda AMTR_s00048p00089530 I
AMTR_s00109p00072520 Amborella trichopoda AMTR_s00109p00072520 I
HDG12 Arabidopsis thaliana AT1G17920 I
GL2 Arabidopsis thaliana AT1G79840 I
HDG3 Arabidopsis thaliana AT2G32370 I
HDG8 Arabidopsis thaliana AT3G03260 I
HDG4 Arabidopsis thaliana AT4G17710 I
BGIOSGA021700 Oryza indica BGIOSGA021700 I
Bo00831s050 Brassica oleracea Bo00831s050 I
Bo1g154790 Brassica oleracea Bo1g154790 I
Bo2g013570 Brassica oleracea Bo2g013570 I
Bo2g018400 Brassica oleracea Bo2g018400 I
Bo4g045920 Brassica oleracea Bo4g045920 I
Bo4g177910 Brassica oleracea Bo4g177910 I
Bo5g150100 Brassica oleracea Bo5g150100 I
Bo6g069620 Brassica oleracea Bo6g069620 I
Bo6g079990 Brassica oleracea Bo6g079990 I
Bo8g049710 Brassica oleracea Bo8g049710 I
Bo8g067530 Brassica oleracea Bo8g067530 I
Bra003213 Brassica rapa Bra003213 I
Bra003535 Brassica rapa Bra003535 I
Bra003846 Brassica rapa Bra003846 I
Bra005588 Brassica rapa Bra005588 I
Bra007562 Brassica rapa Bra007562 I
Bra008562 Brassica rapa Bra008562 I
Bra016578 Brassica rapa Bra016578 I
Bra020066 Brassica rapa Bra020066 I
Bra021035 Brassica rapa Bra021035 I
Bra021779 Brassica rapa Bra021779 I
Bra023611 Brassica rapa Bra023611 I
Bra025938 Brassica rapa Bra025938 I
Bra032003 Brassica rapa Bra032003 I
Bra038757 Brassica rapa Bra038757 I
BRADI1G46247 Brachypodium distachyon BRADI1G46247 I
BRADI5G18717 Brachypodium distachyon BRADI5G18717 I
BRADI5G22570 Brachypodium distachyon BRADI5G22570 I
F775_16103 Aegilops tauschii F775_16103 I
F775_24971 Aegilops tauschii F775_24971 I
GLYMA01G45070 Glycine max GLYMA01G45070 I
GLYMA05G33520 Glycine max GLYMA05G33520 I
GLYMA07G02220 Glycine max GLYMA07G02220 I
GLYMA08G06190 Glycine max GLYMA08G06190 I
GLYMA08G21890 Glycine max GLYMA08G21890 I
GLYMA11G00570 Glycine max GLYMA11G00570 I
GLYMA13G43350 Glycine max GLYMA13G43350 I
GLYMA15G01960 Glycine max GLYMA15G01960 I
GSMUA_Achr11G03290_001 Musa acuminata GSMUA_Achr11G03290_001 I
GSMUA_Achr2G15140_001 Musa acuminata GSMUA_Achr2G15140_001 I
GSMUA_Achr3G12410_001 Musa acuminata GSMUA_Achr3G12410_001 I
GSMUA_Achr3G15400_001 Musa acuminata GSMUA_Achr3G15400_001 I
GSMUA_Achr4G19010_001 Musa acuminata GSMUA_Achr4G19010_001 I
GSMUA_Achr7G00210_001 Musa acuminata GSMUA_Achr7G00210_001 I
GSMUA_Achr8G27340_001 Musa acuminata GSMUA_Achr8G27340_001 I
LPERR01G27250 Leersia perrieri LPERR01G27250 I
LPERR06G06240 Leersia perrieri LPERR06G06240 I
MTR_2g101720 Medicago truncatula MTR_2g101720 I
OB01G40650 Oryza brachyantha OB01G40650 I
OB06G16250 Oryza brachyantha OB06G16250 I
OB09G23660 Oryza brachyantha OB09G23660 I
OBART01G31750 Oryza barthii OBART01G31750 I
OBART06G06830 Oryza barthii OBART06G06830 I
OGLUM01G35890 Oryza glumaepatula OGLUM01G35890 I
OGLUM06G07200 Oryza glumaepatula OGLUM06G07200 I
OMERI06G08000 Oryza meridionalis OMERI06G08000 I
ONIVA01G36080 Oryza nivara ONIVA01G36080 I
ONIVA06G08130 Oryza nivara ONIVA06G08130 I
OPUNC01G30780 Oryza punctata OPUNC01G30780 I
OPUNC06G06470 Oryza punctata OPUNC06G06470 I
ORGLA01G0257700 Oryza glaberrima ORGLA01G0257700 I
ORGLA06G0063600 Oryza glaberrima ORGLA06G0063600 I
ORGLA06G0247800 Oryza glaberrima ORGLA06G0247800 I
ORUFI01G34950 Oryza rufipogon ORUFI01G34950 I
ORUFI06G07070 Oryza rufipogon ORUFI06G07070 I
OS01G0760800 Oryza sativa OS01G0760800 I
OS06G0208100 Oryza sativa OS06G0208100 I
OS09G0526300 Oryza sativa OS09G0526300 I
PGSC0003DMG400002627 Solanum tuberosum PGSC0003DMG400002627 I
PGSC0003DMG400007733 Solanum tuberosum PGSC0003DMG400007733 I
PGSC0003DMG400014279 Solanum tuberosum PGSC0003DMG400014279 I
PGSC0003DMG400026962 Solanum tuberosum PGSC0003DMG400026962 I
PGSC0003DMG400043695 Solanum tuberosum PGSC0003DMG400043695 I
POPTR_0001s18470 Populus trichocarpa POPTR_0001s18470 I
POPTR_0003s05100 Populus trichocarpa POPTR_0003s05100 I
POPTR_0004s07310 Populus trichocarpa POPTR_0004s07310 I
POPTR_0012s13390 Populus trichocarpa POPTR_0012s13390 I
POPTR_0015s13340 Populus trichocarpa POPTR_0015s13340 I
POPTR_0017s01400 Populus trichocarpa POPTR_0017s01400 I
PRUPE_ppa001840mg Prunus persica PRUPE_ppa001840mg I
PRUPE_ppa001894mg Prunus persica PRUPE_ppa001894mg I
PRUPE_ppa002343mg Prunus persica PRUPE_ppa002343mg I
Sb03g036820 Sorghum bicolor Sb03g036820 I
Sb10g006820 Sorghum bicolor Sb10g006820 I
SELMODRAFT_234698 Selaginella moellendorffii SELMODRAFT_234698 I
SELMODRAFT_450555 Selaginella moellendorffii SELMODRAFT_450555 I
SELMODRAFT_450557 Selaginella moellendorffii SELMODRAFT_450557 I
SELMODRAFT_450564 Selaginella moellendorffii SELMODRAFT_450564 I
Si004904m.g Setaria italica Si004904m.g I
Si005966m.g Setaria italica Si005966m.g I
Solyc03g026070.2 Solanum lycopersicum Solyc03g026070.2 I
Solyc03g120620.2 Solanum lycopersicum Solyc03g120620.2 I
Solyc05g015030.1 Solanum lycopersicum Solyc05g015030.1 I
Solyc06g072310.2 Solanum lycopersicum Solyc06g072310.2 I
Solyc08g062510.2 Solanum lycopersicum Solyc08g062510.2 I
Solyc09g066030.1 Solanum lycopersicum Solyc09g066030.1 I
Solyc09g066060.1 Solanum lycopersicum Solyc09g066060.1 I
Solyc11g011940.1 Solanum lycopersicum Solyc11g011940.1 I
TCM_015114 Theobroma cacao TCM_015114 I
TCM_017892 Theobroma cacao TCM_017892 I
TCM_025205 Theobroma cacao TCM_025205 I
TCM_028767 Theobroma cacao TCM_028767 I
TRAES3BF023000040CFD_g Triticum aestivum TRAES3BF023000040CFD_g I
Traes_7AS_D4F03387A Triticum aestivum Traes_7AS_D4F03387A I
TRIUR3_28826 Triticum urartu TRIUR3_28826 I
VIT_04s0079g00480 Vitis vinifera VIT_04s0079g00480 I
GL2 Vitis vinifera VIT_09s0002g04340 I
VIT_09s0018g02100 Vitis vinifera VIT_09s0018g02100 I
VIT_16s0100g00670 Vitis vinifera VIT_16s0100g00670 I
Ca_02812 Cicer arietinum Ca_02812 I
Ca_04629 Cicer arietinum Ca_04629 I
Ca_11891 Cicer arietinum Ca_11891 I
Cla006300 Citrullus lanatus Cla006300 I
Cla012872 Citrullus lanatus Cla012872 I
Cla013352 Citrullus lanatus Cla013352 I
Cla014693 Citrullus lanatus Cla014693 I
Cla019695 Citrullus lanatus Cla019695 I
Pm013001 Prunus mume Pm013001 I
Pm013549 Prunus mume Pm013549 I
Pm019365 Prunus mume Pm019365 I
30135.m000188 Ricinus communis 30135.m000188 I
30146.m003568 Ricinus communis 30146.m003568 I
cassava12093.valid.m1 Manihot esculenta cassava12093.valid.m1 I
cassava23105.valid.m1 Manihot esculenta cassava23105.valid.m1 I
cassava31450.valid.m1 Manihot esculenta cassava31450.valid.m1 I
Cucsa.045360 Cucumis sativus Cucsa.045360 I
Cucsa.061970 Cucumis sativus Cucsa.061970 I
Cucsa.086030 Cucumis sativus Cucsa.086030 I
Cucsa.108510 Cucumis sativus Cucsa.108510 I
Cucsa.250870 Cucumis sativus Cucsa.250870 I
mgf007384m Mimulus guttatus mgf007384m I
mgf015186m Mimulus guttatus mgf015186m I
mgf015456m Mimulus guttatus mgf015456m I
mgf017210m Mimulus guttatus mgf017210m I
mgf018185m Mimulus guttatus mgf018185m I
mgf020582m Mimulus guttatus mgf020582m I
mgf022607m Mimulus guttatus mgf022607m I
mgf022779m Mimulus guttatus mgf022779m I
mgf025279m Mimulus guttatus mgf025279m I
mgf025303m Mimulus guttatus mgf025303m I
Aquca_001_00425 Aquilegia coerulea Aquca_001_00425 I
Aquca_012_00126 Aquilegia coerulea Aquca_012_00126 I
Bostr.19046s0037 Boechera stricta Bostr.19046s0037 I
Bostr.20129s0530 Boechera stricta Bostr.20129s0530 I
Bostr.23794s0877 Boechera stricta Bostr.23794s0877 I
Bostr.30275s0233 Boechera stricta Bostr.30275s0233 I
Bostr.7128s0399 Boechera stricta Bostr.7128s0399 I
Bostr.7867s0363 Boechera stricta Bostr.7867s0363 I
Cagra.0094s0026 Capsella grandiflora Cagra.0094s0026 I
Cagra.0288s0001 Capsella grandiflora Cagra.0288s0001 I
Cagra.0352s0025 Capsella grandiflora Cagra.0352s0025 I
Cagra.2098s0060 Capsella grandiflora Cagra.2098s0060 I
Cagra.2175s0023 Capsella grandiflora Cagra.2175s0023 I
Cagra.3356s0062 Capsella grandiflora Cagra.3356s0062 I
Cagra.4849s0002 Capsella grandiflora Cagra.4849s0002 I
Carubv10002574m.g Capsella rubella Carubv10002574m.g I
Carubv10008485m.g Capsella rubella Carubv10008485m.g I
Carubv10015764m.g Capsella rubella Carubv10015764m.g I
Carubv10019989m.g Capsella rubella Carubv10019989m.g I
Carubv10022676m.g Capsella rubella Carubv10022676m.g I
Carubv10028346m.g Capsella rubella Carubv10028346m.g I
Ciclev10006467m.g Citrus clementina Ciclev10006467m.g I
Ciclev10024950m.g Citrus clementina Ciclev10024950m.g I
Eucgr.F02903 Eucalyptus grandis Eucgr.F02903 I
Eucgr.F03040 Eucalyptus grandis Eucgr.F03040 I
Eucgr.K00234 Eucalyptus grandis Eucgr.K00234 I
evm.TU.supercontig_107.25 Carica papaya evm.TU.supercontig_107.25 I
evm.TU.supercontig_178.19 Carica papaya evm.TU.supercontig_178.19 I
evm.TU.supercontig_178.20 Carica papaya evm.TU.supercontig_178.20 I
evm.TU.supercontig_98.6 Carica papaya evm.TU.supercontig_98.6 I
gene13306-v1.0-hybrid Fragaria vesca gene13306-v1.0-hybrid I
Gorai.004G120700 Gossypium raimondii Gorai.004G120700 I
Gorai.006G047300 Gossypium raimondii Gorai.006G047300 I
Gorai.009G135100 Gossypium raimondii Gorai.009G135100 I
Gorai.011G016200 Gossypium raimondii Gorai.011G016200 I
Lus10005757.g Linum usitatissimum Lus10005757.g I
Lus10005759.g Linum usitatissimum Lus10005759.g I
Lus10011440.g Linum usitatissimum Lus10011440.g I
Lus10027437.g Linum usitatissimum Lus10027437.g I
Lus10037554.g Linum usitatissimum Lus10037554.g I
Lus10038877.g Linum usitatissimum Lus10038877.g I
MDP0000142893 Malus domestica MDP0000142893 I
MDP0000204639 Malus domestica MDP0000204639 I
MDP0000233235 Malus domestica MDP0000233235 I
MDP0000322550 Malus domestica MDP0000322550 I
orange1.1g003954m.g Citrus sinensis orange1.1g003954m.g I
orange1.1g004271m.g Citrus sinensis orange1.1g004271m.g I
orange1.1g046202m.g Citrus sinensis orange1.1g046202m.g I
Pavir.Da01949 Panicum virgatum Pavir.Da01949 I
Pavir.Db02040 Panicum virgatum Pavir.Db02040 I
Pavir.Ea02783 Panicum virgatum Pavir.Ea02783 I
SapurV1A.0068s0140 Salix purpurea SapurV1A.0068s0140 I
SapurV1A.0231s0010 Salix purpurea SapurV1A.0231s0010 I
SapurV1A.0370s0030 Salix purpurea SapurV1A.0370s0030 I
SapurV1A.0392s0030 Salix purpurea SapurV1A.0392s0030 I
Thhalv10006969m.g Eutrema salsugineum Thhalv10006969m.g I
Thhalv10012776m.g Eutrema salsugineum Thhalv10012776m.g I
Thhalv10015677m.g Eutrema salsugineum Thhalv10015677m.g I
Thhalv10017809m.g Eutrema salsugineum Thhalv10017809m.g I
Thhalv10018234m.g Eutrema salsugineum Thhalv10018234m.g I
Thhalv10021974m.g Eutrema salsugineum Thhalv10021974m.g I
Thhalv10026759m.g Eutrema salsugineum Thhalv10026759m.g I
PK00670.1 Cannabis sativa PK00670.1 I
PK06948.1 Cannabis sativa PK06948.1 I
PDK_20s1301341g001 Phoenix dactylifera PDK_20s1301341g001 I
PDK_20s1897821g002 Phoenix dactylifera PDK_20s1897821g002 I
AACERI_AaceriABL099W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL099W I
CAGL0K11902g Candida glabrata CAGL0K11902g I
Ecym_5131 Eremothecium cymbalariae Ecym_5131 I
KAFR_0E01250 Kazachstania africana KAFR_0E01250 I
KLLA0_F04213g Kluyveromyces lactis KLLA0_F04213g I
KNAG_0H01260 Kazachstania naganishii KNAG_0H01260 I
Kpol_1061p11 Vanderwaltozyma polyspora Kpol_1061p11 I
NDAI_0A05750 Naumovozyma dairenensis NDAI_0A05750 I
SKUD_203807 Saccharomyces kudriavzevii SKUD_203807 I
SU7_0595 Saccharomyces arboricola SU7_0595 I
TPHA_0M01040 Tetrapisispora phaffii TPHA_0M01040 I
ZBAI_04585 Zygosaccharomyces bailii ZBAI_04585 I
ZBAI_06624 Zygosaccharomyces bailii ZBAI_06624 I
ZYRO0A03058g Zygosaccharomyces rouxii ZYRO0A03058g I
21342_YDR034C Saccharomyces bayanus 21342_YDR034C I
3344_Multiple Saccharomyces mikatae 3344_Multiple I
3859_YDR034C Saccharomyces paradoxus 3859_YDR034C I
SAKL0D03586g Lachancea kluyveri SAKL0D03586g I
Bra021363 Brassica rapa Bra021363 N
AGOS_ABL099W Ashbya gossypii AGOS_ABL099W N
KLTH0C07480g Lachancea thermotolerans KLTH0C07480g N
KLTH0C07480g Kluyveromyces thermotolerans KLTH0C07480g N