SapurV1A.0091s0280 (Salix purpurea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SapurV1A.0091s0280 T196785_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.857 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.857 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.853 0.889
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.853 0.889
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.847 0.806
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.839 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.722
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0091s0280.1.p GATA 246 281
SapurV1A.0091s0280.2.p GATA 246 281

Links

Other GATA family TFs
Other Salix purpurea TFs

613 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL18 Oryza sativa OS09G0507100 I
ONIVA08G24550 Oryza nivara ONIVA08G24550 I
ONIVA09G16860 Oryza nivara ONIVA09G16860 I
OPUNC01G41070 Oryza punctata OPUNC01G41070 I
OPUNC08G19660 Oryza punctata OPUNC08G19660 I
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I
SPL16 Oryza sativa OS08G0531600 I
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I
SPL19 Oryza sativa OS11G0496600 I
Sb02g029300 Sorghum bicolor Sb02g029300 I
Sb03g044160 Sorghum bicolor Sb03g044160 I
Sb05g017510 Sorghum bicolor Sb05g017510 I
Si026656m.g Setaria italica Si026656m.g I
mgf003797m Mimulus guttatus mgf003797m I
mgf010913m Mimulus guttatus mgf010913m I
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I
OMERI06G13610 Oryza meridionalis OMERI06G13610 I
BGIOSGA005075 Oryza indica BGIOSGA005075 I
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I
GRMZM2G061734 Zea mays GRMZM2G061734 I
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I
LPERR01G36700 Leersia perrieri LPERR01G36700 I
LPERR08G18310 Leersia perrieri LPERR08G18310 I
LPERR09G11920 Leersia perrieri LPERR09G11920 I
MLOC_52321 Hordeum vulgare MLOC_52321 I
OBART09G15750 Oryza barthii OBART09G15750 I
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I
OMERI01G39190 Oryza meridionalis OMERI01G39190 I
ONIVA01G48230 Oryza nivara ONIVA01G48230 I
Sb07g026220 Sorghum bicolor Sb07g026220 N
Si013747m.g Setaria italica Si013747m.g N
GRMZM2G101511 Zea mays GRMZM2G101511 N
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N
Pavir.J28847 Panicum virgatum Pavir.J28847 N
Pavir.J30793 Panicum virgatum Pavir.J30793 N