CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf003797m
(
Mimulus guttatus
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
mgf003797m
T323353_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.916
0.787
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf003797m
SBP
20
94
CLVDGCNADLSLCRDYHRRHKVCETHSKTSKVTIGGRELRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKP
Links
Other
SBP
family TFs
Other
Mimulus guttatus
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf010913m
Mimulus guttatus
mgf010913m
I
0.984
PK19500.1
Cannabis sativa
PK19500.1
I
0.962
BRADI4G34667
Brachypodium distachyon
BRADI4G34667
I
0.954
GRMZM2G061734
Zea mays
GRMZM2G061734
I
0.954
Sb02g029300
Sorghum bicolor
Sb02g029300
I
0.954
BRADI3G41250
Brachypodium distachyon
BRADI3G41250
I
0.950
OGLUM08G22810
Oryza glumaepatula
OGLUM08G22810
I
0.950
OMERI06G13610
Oryza meridionalis
OMERI06G13610
I
0.950
SPL16
Oryza sativa
OS08G0531600
I
0.950
LPERR08G18310
Leersia perrieri
LPERR08G18310
I
0.948
LPERR09G11920
Leersia perrieri
LPERR09G11920
I
0.947
OBART09G15750
Oryza barthii
OBART09G15750
I
0.947
OGLUM09G16320
Oryza glumaepatula
OGLUM09G16320
I
0.947
ONIVA09G16860
Oryza nivara
ONIVA09G16860
I
0.947
SPL18
Oryza sativa
OS09G0507100
I
0.947
ORGLA08G0230100
Oryza glaberrima
ORGLA08G0230100
I
0.945
OPUNC08G19660
Oryza punctata
OPUNC08G19660
I
0.942
Lus10011348.g
Linum usitatissimum
Lus10011348.g
I
0.939
ONIVA08G24550
Oryza nivara
ONIVA08G24550
I
0.937
TCM_008671
Theobroma cacao
TCM_008671
I
0.937
Gorai.008G166000
Gossypium raimondii
Gorai.008G166000
I
0.937
Aquca_011_00114
Aquilegia coerulea
Aquca_011_00114
I
0.936
Eucgr.K02708
Eucalyptus grandis
Eucgr.K02708
I
0.933
Lus10003126.g
Linum usitatissimum
Lus10003126.g
N
0.933
Si013747m.g
Setaria italica
Si013747m.g
N
0.932
Pavir.Ba01534
Panicum virgatum
Pavir.Ba01534
N
0.932
Pavir.Fb00717
Panicum virgatum
Pavir.Fb00717
N
0.932
Pavir.J28847
Panicum virgatum
Pavir.J28847
N
0.932
Pavir.J30793
Panicum virgatum
Pavir.J30793
N
0.932
Sb03g044160
Sorghum bicolor
Sb03g044160
I
0.931
Ciclev10032171m.g
Citrus clementina
Ciclev10032171m.g
I
0.930
orange1.1g021420m.g
Citrus sinensis
orange1.1g021420m.g
I
0.930
PK02140.1
Cannabis sativa
PK02140.1
I
0.929
GSMUA_Achr11G19580_001
Musa acuminata
GSMUA_Achr11G19580_001
I
0.928
LPERR01G36700
Leersia perrieri
LPERR01G36700
I
0.928
VIT_01s0010g03910
Vitis vinifera
VIT_01s0010g03910
I
0.927
GLYMA08G01450
Glycine max
GLYMA08G01450
I
0.926
POPTR_0012s10260
Populus trichocarpa
POPTR_0012s10260
I
0.925
POPTR_0015s11100
Populus trichocarpa
POPTR_0015s11100
I
0.925
PRUPE_ppa006611mg
Prunus persica
PRUPE_ppa006611mg
I
0.925
Cla002666
Citrullus lanatus
Cla002666
I
0.925
Pm024528
Prunus mume
Pm024528
I
0.925
Cucsa.392170
Cucumis sativus
Cucsa.392170
I
0.925
Gorai.005G164600
Gossypium raimondii
Gorai.005G164600
I
0.925
BGIOSGA005075
Oryza indica
BGIOSGA005075
I
0.924
LPERR11G11330
Leersia perrieri
LPERR11G11330
I
0.924
OGLUM01G46420
Oryza glumaepatula
OGLUM01G46420
I
0.924
OMERI01G39190
Oryza meridionalis
OMERI01G39190
I
0.924
ONIVA01G48230
Oryza nivara
ONIVA01G48230
I
0.924
OPUNC01G41070
Oryza punctata
OPUNC01G41070
I
0.924
ORGLA01G0361700
Oryza glaberrima
ORGLA01G0361700
I
0.924
ORUFI01G45560
Oryza rufipogon
ORUFI01G45560
I
0.924
30147.m014478
Ricinus communis
30147.m014478
I
0.923
MTR_8g096780
Medicago truncatula
MTR_8g096780
I
0.922
scaffold_801495.1
Arabidopsis lyrata
scaffold_801495.1
I
0.922
Ca_05711
Cicer arietinum
Ca_05711
I
0.922
GLYMA04G37391
Glycine max
GLYMA04G37391
I
0.919
GLYMA06G17700
Glycine max
GLYMA06G17700
I
0.919
GSMUA_AchrUn_randomG05850_001
Musa acuminata
GSMUA_AchrUn_randomG05850_001
I
0.919
MTR_3g099080
Medicago truncatula
MTR_3g099080
I
0.919
Ca_01426
Cicer arietinum
Ca_01426
I
0.919
Gorai.002G181700
Gossypium raimondii
Gorai.002G181700
I
0.919
SapurV1A.0168s0440
Salix purpurea
SapurV1A.0168s0440
I
0.919
Bo9g097630
Brassica oleracea
Bo9g097630
I
0.918
GLYMA05G38180
Glycine max
GLYMA05G38180
I
0.918
VIT_17s0000g01260
Vitis vinifera
VIT_17s0000g01260
I
0.918
gene06295-v1.0-hybrid
Fragaria vesca
gene06295-v1.0-hybrid
I
0.918
Thhalv10013892m.g
Eutrema salsugineum
Thhalv10013892m.g
I
0.918
AMTR_s00013p00150040
Amborella trichopoda
AMTR_s00013p00150040
I
0.917
SapurV1A.1018s0120
Salix purpurea
SapurV1A.1018s0120
I
0.917
SPL13A
Arabidopsis thaliana
AT5G50570
I
0.916
SPL13A
Arabidopsis thaliana
AT5G50670
D
0.916
Bo3g024180
Brassica oleracea
Bo3g024180
I
0.916
Cagra.0117s0007
Capsella grandiflora
Cagra.0117s0007
I
0.916
Carubv10026628m.g
Capsella rubella
Carubv10026628m.g
I
0.916
GSMUA_Achr7G22940_001
Musa acuminata
GSMUA_Achr7G22940_001
I
0.915
GSMUA_AchrUn_randomG08380_001
Musa acuminata
GSMUA_AchrUn_randomG08380_001
I
0.915
Sb05g017510
Sorghum bicolor
Sb05g017510
I
0.915
Bostr.15774s0206
Boechera stricta
Bostr.15774s0206
I
0.915
Bra022766
Brassica rapa
Bra022766
I
0.914
GSMUA_Achr6G06030_001
Musa acuminata
GSMUA_Achr6G06030_001
I
0.912
MLOC_52321
Hordeum vulgare
MLOC_52321
I
0.912
GSMUA_Achr2G06150_001
Musa acuminata
GSMUA_Achr2G06150_001
I
0.911
GSMUA_AchrUn_randomG21900_001
Musa acuminata
GSMUA_AchrUn_randomG21900_001
I
0.911
Cucsa.157230
Cucumis sativus
Cucsa.157230
I
0.910
BRADI2G59110
Brachypodium distachyon
BRADI2G59110
I
0.908
GSMUA_Achr9G29330_001
Musa acuminata
GSMUA_Achr9G29330_001
I
0.907
OS01G0922600
Oryza sativa
OS01G0922600
I
0.906
PGSC0003DMG400021902
Solanum tuberosum
PGSC0003DMG400021902
I
0.905
Solyc05g015840.2
Solanum lycopersicum
Solyc05g015840.2
I
0.905
TCM_014668
Theobroma cacao
TCM_014668
I
0.905
evm.TU.supercontig_1141.2
Carica papaya
evm.TU.supercontig_1141.2
I
0.905
GSMUA_Achr9G01380_001
Musa acuminata
GSMUA_Achr9G01380_001
I
0.903
cassava42933.valid.m1
Manihot esculenta
cassava42933.valid.m1
I
0.903
cassava6548.valid.m1
Manihot esculenta
cassava6548.valid.m1
I
0.903
GRMZM2G101511
Zea mays
GRMZM2G101511
N
0.902
GRMZM2G371033
Zea mays
GRMZM2G371033
I
0.902
GSMUA_Achr6G27520_001
Musa acuminata
GSMUA_Achr6G27520_001
I
0.902
OBART01G42150
Oryza barthii
OBART01G42150
I
0.902
Sb07g026220
Sorghum bicolor
Sb07g026220
N
0.902
MDP0000176265
Malus domestica
MDP0000176265
I
0.901
29929.m004627
Ricinus communis
29929.m004627
I
0.900
cassava17811.valid.m1
Manihot esculenta
cassava17811.valid.m1
I
0.898
Ciclev10031834m.g
Citrus clementina
Ciclev10031834m.g
I
0.898
Lus10015764.g
Linum usitatissimum
Lus10015764.g
I
0.898
orange1.1g016971m.g
Citrus sinensis
orange1.1g016971m.g
I
0.898
Cla004156
Citrullus lanatus
Cla004156
I
0.897
Cucsa.054050
Cucumis sativus
Cucsa.054050
I
0.897
Cla001541
Citrullus lanatus
Cla001541
I
0.896
Cucsa.349620
Cucumis sativus
Cucsa.349620
I
0.896
Cla019579
Citrullus lanatus
Cla019579
I
0.895
ORUFI08G24030
Oryza rufipogon
ORUFI08G24030
N
0.894
Si026656m.g
Setaria italica
Si026656m.g
I
0.891
Pavir.Hb01173
Panicum virgatum
Pavir.Hb01173
I
0.891
Si001804m.g
Setaria italica
Si001804m.g
I
0.890
Gorai.012G185700
Gossypium raimondii
Gorai.012G185700
N
0.890
Pavir.Ea03909
Panicum virgatum
Pavir.Ea03909
I
0.890
Pavir.J02262
Panicum virgatum
Pavir.J02262
I
0.890
GRMZM2G106798
Zea mays
GRMZM2G106798
I
0.886
Gorai.013G095700
Gossypium raimondii
Gorai.013G095700
I
0.886