TFCP2L1 (Otolemur garnettii)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSOGAG00000012031 T199142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		1.000 1.000
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		1.000 1.000
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		1.000 1.000
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.962 0.962
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.962 0.962
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.962 0.962
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.847 0.847
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.770 0.770
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.770 0.770
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.770 0.770
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.770 0.770
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000010765 Grainyhead 25 240

Links

Other Grainyhead family TFs
Other Otolemur garnettii TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000260359 Malus domestica MDP0000260359 N
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N
gene02091-v1.0-hybrid Fragaria vesca gene02091-v1.0-hybrid N
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N
Gorai.011G076900 Gossypium raimondii Gorai.011G076900 N
Lus10025772.g Linum usitatissimum Lus10025772.g N
Lus10035893.g Linum usitatissimum Lus10035893.g N
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N
MDP0000276691 Malus domestica MDP0000276691 N
MDP0000500940 Malus domestica MDP0000500940 N
MDP0000578820 Malus domestica MDP0000578820 N
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N
PK03816.1 Cannabis sativa PK03816.1 N
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N
GLYMA15G01730 Glycine max GLYMA15G01730 N
MTR_2g102227 Medicago truncatula MTR_2g102227 N
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N
TCM_028688 Theobroma cacao TCM_028688 N
GLYMA13G43651 Glycine max GLYMA13G43651 N
Cla015679 Citrullus lanatus Cla015679 N
Pm013502 Prunus mume Pm013502 N
Pm027397 Prunus mume Pm027397 N
29872.m000548 Ricinus communis 29872.m000548 N
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N
Cucsa.358990 Cucumis sativus Cucsa.358990 N
mgf024433m Mimulus guttatus mgf024433m N
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N