CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm027957
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm027957
T201988_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm027957
GRAS
427
801
LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPDGDGSQRLAHFFANALEARMAGTGTGTQMFYASLASKRTSVVDTLKAYQVHLSACPFKRISLFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRPGGPPKLRITGIEVPQPGFRPADWIEETGRRLAKYCERFNVPFEYNAIASQNWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDINIARDNEERLMFESFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDEDMLKIFKDKVKAWYHKDFVIDQDSDWMLQGWKGRIVYASSCWV
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.702
POPTR_0001s24860
Populus trichocarpa
POPTR_0001s24860
N
0.717
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.711
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.719
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.971
TCM_041814
Theobroma cacao
TCM_041814
N
0.755
Pm000718
Prunus mume
Pm000718
N
1.000
28650.m000190
Ricinus communis
28650.m000190
N
0.722
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
0.748
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.748
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
0.710
MDP0000247940
Malus domestica
MDP0000247940
N
0.890
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.745
SapurV1A.0040s0480
Salix purpurea
SapurV1A.0040s0480
N
0.703
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
0.724