CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000247940
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000247940
T202838_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000247940
GRAS
432
807
LRNLLILCAQALSTNDFKTTSELLKKVRQHSSPNGDGSQRLAHFFANGLEARMAGTGTGTQMFYTSLASKRTPAVEILKAYQVHLSACPFKRMSIFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRAGGPPKLRITGIEVPQPGFRPAEWIDETGRRLARYCERFNVPFEYNAIASQNWESIQLEDLKTERNEVLAVNSMLRFKNLLDETAEVNCPRDAVLKLIRRMKPDIFVHSIINGSYTAPFFDTRFREALFHYSALYDAFDINIPRDNEERLMFEREFYGREVMNVIACEGVERVERPETYKQWQVRCMRAGLQLLPVDQGLLKIFKDKVKAWYHKDFEIDQDSDWMLQGWKGRIVYASSCWV
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0001s24860
Populus trichocarpa
POPTR_0001s24860
N
0.706
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.700
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.717
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.893
TCM_041814
Theobroma cacao
TCM_041814
N
0.727
Pm000718
Prunus mume
Pm000718
N
0.890
Pm027957
Prunus mume
Pm027957
N
0.890
28650.m000190
Ricinus communis
28650.m000190
N
0.717
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.730
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
0.703
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.727
SapurV1A.0040s0480
Salix purpurea
SapurV1A.0040s0480
N
0.703
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
0.711