CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000289783
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000289783
T202859_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000289783
GRAS
287
659
LCTMLTQCAQAVASYDQQTASELIKKIRKHSSPYGEATERLAYYFANALEARLAGSRTPSYSPLLSPQTPATEILKAHQVYITSCPFMKMMYFFANRTIMKLAENATRLHIIDFGISYGFQWPCLIQRLSERCGGPPNLRFTAIELPQPGFRPTERVEETMRRLEKYAKRFVVPFEYNVIAQKWETIRFEDLKVDRNELTVVNCMRRLRHIPDETVVMSSPRDTVLNLIKKINPDLFIHGVVNGTYNSPFFVKRFREALFHYSSLFDMFEATIPREDEHRLMFEGAVYGRDIMNVIACEGIERVERPETYKHWQVRYQRAGFKQVPLDQELMRKVKAMLKLMRYHNDFRIDEDGHWMLQGWKGRIVMALSALK
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.795
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.797
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.768
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.743
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.727
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.770
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.781
Pm000713
Prunus mume
Pm000713
N
0.811
Pm000714
Prunus mume
Pm000714
N
0.732
Pm000716
Prunus mume
Pm000716
N
0.778
Pm000717
Prunus mume
Pm000717
N
0.789
gene30178-v1.0-hybrid
Fragaria vesca
gene30178-v1.0-hybrid
N
0.704
MDP0000287041
Malus domestica
MDP0000287041
N
0.773
MDP0000796348
Malus domestica
MDP0000796348
N
0.786
MDP0000851230
Malus domestica
MDP0000851230
N
0.773