orange1.1g039114m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g039114m.g T202944_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g039114m GRAS 254 625

Links

Other GRAS family TFs
Other Citrus sinensis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac046 Arabidopsis thaliana AT3G04060 D 0.000
NAC59 Arabidopsis thaliana AT3G29035 D 0.000
NAC079 Arabidopsis thaliana AT5G07680 D 0.000
ANAC087 Arabidopsis thaliana AT5G18270 D 0.000
NAC92 Arabidopsis thaliana AT5G39610 D 0.000
NAC098 Arabidopsis thaliana AT5G53950 D 0.000
NAC100 Arabidopsis thaliana AT5G61430 D 0.000
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D 0.000
ANAC100 Arabidopsis lyrata fgenesh2_kg.8__2118__AT5G61430.1 D 0.000
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D 0.000
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I 0.000
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I 0.000
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.000
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I 0.000
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.000
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.000
BGIOSGA022861 Oryza indica BGIOSGA022861 I 0.000
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.000
Bo00578s090 Brassica oleracea Bo00578s090 I 0.000
Bo1g152230 Brassica oleracea Bo1g152230 I 0.000
Bo2g008760 Brassica oleracea Bo2g008760 I 0.000
Bo2g015440 Brassica oleracea Bo2g015440 I 0.000
Bo2g043280 Brassica oleracea Bo2g043280 I 0.000
Bo2g161570 Brassica oleracea Bo2g161570 I 0.000
Bo3g013050 Brassica oleracea Bo3g013050 I 0.000
Bo5g148430 Brassica oleracea Bo5g148430 I 0.000
Bo6g062160 Brassica oleracea Bo6g062160 I 0.000
Bo7g087220 Brassica oleracea Bo7g087220 I 0.000
Bo7g098620 Brassica oleracea Bo7g098620 I 0.000
Bo9g008770 Brassica oleracea Bo9g008770 I 0.000
Bo9g113820 Brassica oleracea Bo9g113820 I 0.000
Bo9g157320 Brassica oleracea Bo9g157320 I 0.000
Bo9g175670 Brassica oleracea Bo9g175670 I 0.000
Bra002148 Brassica rapa Bra002148 I 0.000
Bra003023 Brassica rapa Bra003023 I 0.000
Bra006449 Brassica rapa Bra006449 I 0.000
Bra009246 Brassica rapa Bra009246 I 0.000
Bra012960 Brassica rapa Bra012960 I 0.000
Bra022685 Brassica rapa Bra022685 I 0.000
Bra023669 Brassica rapa Bra023669 I 0.000
Bra025374 Brassica rapa Bra025374 I 0.000
Bra025658 Brassica rapa Bra025658 I 0.000
Bra028435 Brassica rapa Bra028435 I 0.000
Bra028685 Brassica rapa Bra028685 I 0.000
Bra029313 Brassica rapa Bra029313 I 0.000
Bra031950 Brassica rapa Bra031950 I 0.000
Bra036223 Brassica rapa Bra036223 I 0.000
Bra040153 Brassica rapa Bra040153 I 0.000
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I 0.000
F775_16032 Aegilops tauschii F775_16032 I 0.000
F775_24687 Aegilops tauschii F775_24687 I 0.000
F775_29256 Aegilops tauschii F775_29256 I 0.000
F775_29497 Aegilops tauschii F775_29497 I 0.000
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.000
anac046 Arabidopsis lyrata fgenesh2_kg.3__366__AT3G04060.1 I 0.000
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I 0.000
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I 0.000
GLYMA02G07760 Glycine max GLYMA02G07760 I 0.000
GLYMA04G33270 Glycine max GLYMA04G33270 I 0.000
GLYMA05G00930 Glycine max GLYMA05G00930 I 0.000
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.000
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.000
GLYMA09G37050 Glycine max GLYMA09G37050 I 0.000
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.000
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.000
GLYMA13G05540 Glycine max GLYMA13G05540 I 0.000
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.000
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.000
GLYMA16G26810 Glycine max GLYMA16G26810 I 0.000
GLYMA17G10970 Glycine max GLYMA17G10970 I 0.000
GLYMA18G49620 Glycine max GLYMA18G49620 I 0.000
GLYMA19G02850 Glycine max GLYMA19G02850 I 0.000
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.000
GRMZM2G031001 Zea mays GRMZM2G031001 I 0.000
GRMZM2G159500 Zea mays GRMZM2G159500 I 0.000
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.000
GRMZM2G393433 Zea mays GRMZM2G393433 I 0.000
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I 0.000
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I 0.000
GSMUA_Achr10G26180_001 Musa acuminata GSMUA_Achr10G26180_001 I 0.000
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I 0.000
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.000
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.000
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I 0.000
GSMUA_Achr7G18330_001 Musa acuminata GSMUA_Achr7G18330_001 I 0.000
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.000
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I 0.000
LPERR01G00270 Leersia perrieri LPERR01G00270 I 0.000
LPERR06G12840 Leersia perrieri LPERR06G12840 I 0.000
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.000
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.000
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.000
MTR_3g070030 Medicago truncatula MTR_3g070030 I 0.000
MTR_3g435150 Medicago truncatula MTR_3g435150 I 0.000
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.000
MTR_6g012670 Medicago truncatula MTR_6g012670 I 0.000
MTR_6g032770 Medicago truncatula MTR_6g032770 I 0.000
MTR_7g085260 Medicago truncatula MTR_7g085260 I 0.000
OB01G10300 Oryza brachyantha OB01G10300 I 0.000
OB06G22100 Oryza brachyantha OB06G22100 I 0.000
OBART01G00360 Oryza barthii OBART01G00360 I 0.000
OBART01G16620 Oryza barthii OBART01G16620 I 0.000
OBART06G13940 Oryza barthii OBART06G13940 I 0.000
OBART09G15220 Oryza barthii OBART09G15220 I 0.000
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.000
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.000
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I 0.000
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.000
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.000
OLONG_019251 Oryza longistaminata OLONG_019251 I 0.000
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.000
OMERI01G15210 Oryza meridionalis OMERI01G15210 I 0.000
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.000
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.000
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.000
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.000
ONIVA03G33370 Oryza nivara ONIVA03G33370 I 0.000
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.000
OPUNC01G00320 Oryza punctata OPUNC01G00320 I 0.000
OPUNC06G13130 Oryza punctata OPUNC06G13130 I 0.000
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.000
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I 0.000
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.000
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.000
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.000
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.000
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I 0.000
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.000
OS01G0104500 Oryza sativa OS01G0104500 I 0.000
OS01G0393100 Oryza sativa OS01G0393100 I 0.000
OS06G0344900 Oryza sativa OS06G0344900 I 0.000
OS09G0497900 Oryza sativa OS09G0497900 I 0.000
PGSC0003DMG400001338 Solanum tuberosum PGSC0003DMG400001338 I 0.000
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I 0.000
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.000
POPTR_0013s05110 Populus trichocarpa POPTR_0013s05110 I 0.000
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.000
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I 0.000
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.000
PRUPE_ppa007883mg Prunus persica PRUPE_ppa007883mg I 0.000
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I 0.000
Sb01g036590 Sorghum bicolor Sb01g036590 I 0.000
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.000
Sb08g006330 Sorghum bicolor Sb08g006330 I 0.000
Si002074m.g Setaria italica Si002074m.g I 0.000
Si007886m.g Setaria italica Si007886m.g I 0.000
Si030187m.g Setaria italica Si030187m.g I 0.000
Solyc02g088180.2 Solanum lycopersicum Solyc02g088180.2 I 0.000
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.000
TCM_014073 Theobroma cacao TCM_014073 I 0.000
TCM_018621 Theobroma cacao TCM_018621 I 0.000
TCM_026028 Theobroma cacao TCM_026028 I 0.000
TCM_031619 Theobroma cacao TCM_031619 I 0.000
TCM_034835 Theobroma cacao TCM_034835 I 0.000
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.000
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.000
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I 0.000
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I 0.000
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I 0.000
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I 0.000
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.000
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I 0.000
Traes_7AS_7A7A0CF5B Triticum aestivum Traes_7AS_7A7A0CF5B I 0.000
Traes_7DS_2452C1E32 Triticum aestivum Traes_7DS_2452C1E32 I 0.000
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.000
TRIUR3_25136 Triticum urartu TRIUR3_25136 I 0.000
TRIUR3_35152 Triticum urartu TRIUR3_35152 I 0.000
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I 0.000
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I 0.000
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.000
Ca_08255 Cicer arietinum Ca_08255 I 0.000
Ca_19144 Cicer arietinum Ca_19144 I 0.000
Ca_22370 Cicer arietinum Ca_22370 I 0.000
Ca_22532 Cicer arietinum Ca_22532 I 0.000
Cla012339 Citrullus lanatus Cla012339 I 0.000
Cla017258 Citrullus lanatus Cla017258 I 0.000
Cla023717 Citrullus lanatus Cla023717 I 0.000
Pm011397 Prunus mume Pm011397 I 0.000
Pm015914 Prunus mume Pm015914 I 0.000
Pm024887 Prunus mume Pm024887 I 0.000
Pm025307 Prunus mume Pm025307 I 0.000
27950.m000105 Ricinus communis 27950.m000105 I 0.000
28649.m000212 Ricinus communis 28649.m000212 I 0.000
29950.m001171 Ricinus communis 29950.m001171 I 0.000
30170.m014236 Ricinus communis 30170.m014236 I 0.000
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I 0.000
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I 0.000
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I 0.000
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I 0.000
cassava41252.m1 Manihot esculenta cassava41252.m1 I 0.000
cassava44869.m1 Manihot esculenta cassava44869.m1 I 0.000
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.000
Cucsa.112890 Cucumis sativus Cucsa.112890 I 0.000
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.000
Cucsa.338700 Cucumis sativus Cucsa.338700 I 0.000
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I 0.000
mgf003818m Mimulus guttatus mgf003818m I 0.000
mgf023988m Mimulus guttatus mgf023988m I 0.000
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I 0.000
Aquca_007_00948 Aquilegia coerulea Aquca_007_00948 I 0.000
Aquca_014_00944 Aquilegia coerulea Aquca_014_00944 I 0.000
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.000
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.000
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I 0.000
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I 0.000
Bostr.2570s0302 Boechera stricta Bostr.2570s0302 I 0.000
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.000
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I 0.000
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I 0.000
Cagra.0542s0037 Capsella grandiflora Cagra.0542s0037 I 0.000
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.000
Cagra.2026s0002 Capsella grandiflora Cagra.2026s0002 I 0.000
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I 0.000
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I 0.000
Cagra.6981s0001 Capsella grandiflora Cagra.6981s0001 I 0.000
Carubv10001372m.g Capsella rubella Carubv10001372m.g I 0.000
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.000
Carubv10005201m.g Capsella rubella Carubv10005201m.g I 0.000
Carubv10014118m.g Capsella rubella Carubv10014118m.g I 0.000
Carubv10026752m.g Capsella rubella Carubv10026752m.g I 0.000
Carubv10028330m.g Capsella rubella Carubv10028330m.g I 0.000
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I 0.000
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I 0.000
Ciclev10020549m.g Citrus clementina Ciclev10020549m.g I 0.000
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.000
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I 0.000
Eucgr.I01958 Eucalyptus grandis Eucgr.I01958 I 0.000
Eucgr.K01472 Eucalyptus grandis Eucgr.K01472 I 0.000
evm.TU.supercontig_111.22 Carica papaya evm.TU.supercontig_111.22 I 0.000
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I 0.000
evm.TU.supercontig_14.101 Carica papaya evm.TU.supercontig_14.101 I 0.000
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.000
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.000
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.000
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I 0.000
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.000
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I 0.000
Gorai.007G038100 Gossypium raimondii Gorai.007G038100 I 0.000
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I 0.000
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.000
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.000
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I 0.000
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.000
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I 0.000
Lus10003435.g Linum usitatissimum Lus10003435.g I 0.000
Lus10005537.g Linum usitatissimum Lus10005537.g I 0.000
Lus10026879.g Linum usitatissimum Lus10026879.g I 0.000
Lus10041924.g Linum usitatissimum Lus10041924.g I 0.000
MDP0000135860 Malus domestica MDP0000135860 I 0.000
MDP0000184069 Malus domestica MDP0000184069 I 0.000
MDP0000276765 Malus domestica MDP0000276765 I 0.000
MDP0000310981 Malus domestica MDP0000310981 I 0.000
MDP0000911724 Malus domestica MDP0000911724 I 0.000
orange1.1g016542m.g Citrus sinensis orange1.1g016542m.g I 0.000
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I 0.000
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I 0.000
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.000
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.000
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I 0.000
Pavir.Ib01526 Panicum virgatum Pavir.Ib01526 I 0.000
Pavir.J00978 Panicum virgatum Pavir.J00978 I 0.000
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.000
Pavir.J13094 Panicum virgatum Pavir.J13094 I 0.000
Pavir.J21394 Panicum virgatum Pavir.J21394 I 0.000
Pavir.J39049 Panicum virgatum Pavir.J39049 I 0.000
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I 0.000
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I 0.000
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I 0.000
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I 0.000
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.000
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.000
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I 0.000
Thhalv10004550m.g Eutrema salsugineum Thhalv10004550m.g I 0.000
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I 0.000
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.000
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I 0.000
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I 0.000
Thhalv10021125m.g Eutrema salsugineum Thhalv10021125m.g I 0.000
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I 0.000
PK13860.1 Cannabis sativa PK13860.1 I 0.000
PK26741.1 Cannabis sativa PK26741.1 I 0.000
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.000
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.000
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I 0.000
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.000
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I 0.000
MLOC_64057 Hordeum vulgare MLOC_64057 N 0.000
OMERI03G14250 Oryza meridionalis OMERI03G14250 N 0.000