GLYMA18G52491 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA18G52491 T218912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.831 0.825
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.831 0.825
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.818 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G52491.1 Homeodomain 84 145
GLYMA18G52491.2 Homeodomain 84 145

Links

Other Homeodomain family TFs
Other Glycine max TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I 0.000
TCM_016582 Theobroma cacao TCM_016582 I 0.000
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.000
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.000
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.000
AEPI010666 Anopheles epiroticus AEPI010666 N 0.000
AEPI010384 Anopheles epiroticus AEPI010384 N 0.000
ACUA020431 Anopheles culicifacies ACUA020431 N 0.000
ACHR008505 Anopheles christyi ACHR008505 N 0.000
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.000
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.000
Minc02159 Meloidogyne incognita Minc02159 N 0.000
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.000
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.000
MDP0000690933 Malus domestica MDP0000690933 N 0.000
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.000
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.000
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.000
mgf006959m Mimulus guttatus mgf006959m N 0.000
e_gw.11.656.1 Branchiostoma floridae e_gw.11.656.1 N 0.000
cassava13400.valid.m1 Manihot esculenta cassava13400.valid.m1 N 0.000
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.000
T265_10172 Opisthorchis viverrini T265_10172 N 0.000
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N 0.000
scaffold61-EXSNAP2012.75 Pristionchus exspectatus scaffold61-EXSNAP2012.75 N 0.000
nRc.2.0.1.g21365 Romanomermis culicivorax nRc.2.0.1.g21365 N 0.000
nOo.2.0.1.g12002 Onchocerca ochengi nOo.2.0.1.g12002 N 0.000
NECAME_08983 Necator americanus NECAME_08983 N 0.000
maker-nMf.1.1.scaf28435-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf28435-augustus-gene-0.3 N 0.000
csin109617 Clonorchis sinensis csin109617 N 0.000
AQUA015309 Anopheles quadriannulatus AQUA015309 N 0.000
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.000
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.000
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.000
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.000
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N 0.000
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N 0.000
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N 0.000
YQE_10731 Dendroctonus ponderosae YQE_10731 N 0.000
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.000
OS01G0788800 Oryza sativa OS01G0788800 N 0.000
OMERI08G08060 Oryza meridionalis OMERI08G08060 N 0.000
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.000
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.000
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.000
LOAG_18696 Loa loa LOAG_18696 N 0.000
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.000
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.000
PGSC0003DMG400007775 Solanum tuberosum PGSC0003DMG400007775 N 0.000
GI23625 Drosophila mojavensis FBgn0146351 N 0.000
F775_10961 Aegilops tauschii F775_10961 N 0.000
F775_07305 Aegilops tauschii F775_07305 N 0.000
TLX3 Taeniopygia guttata ENSTGUG00000014966 N 0.000
ENSPTRG00000017522 Pan troglodytes ENSPTRG00000017522 N 0.000
VAX1 Loxodonta africana ENSLAFG00000018107 N 0.000
BRADI3G23370 Brachypodium distachyon BRADI3G23370 N 0.000
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N 0.000
Traes_3AL_F42853DA5 Triticum aestivum Traes_3AL_F42853DA5 N 0.000
Ca_08015 Cicer arietinum Ca_08015 N 0.000
Bo1g131210 Brassica oleracea Bo1g131210 N 0.000
TRIUR3_32002 Triticum urartu TRIUR3_32002 N 0.000
TRIUR3_29318 Triticum urartu TRIUR3_29318 N 0.000
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.000
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.000
TRAES3BF096700040CFD_g Triticum aestivum TRAES3BF096700040CFD_g N 0.000
TRAES3BF096700010CFD_g Triticum aestivum TRAES3BF096700010CFD_g N 0.000
Ca_19697 Cicer arietinum Ca_19697 N 0.000
Traes_2AL_AAEBFA9CC Triticum aestivum Traes_2AL_AAEBFA9CC N 0.000
Traes_1DS_AAEBFA9CC Triticum aestivum Traes_1DS_AAEBFA9CC N 0.000
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.000
Traes_1AS_CA75913B6 Triticum aestivum Traes_1AS_CA75913B6 N 0.000
SINV22981 Solenopsis invicta SINV22981 N 0.000
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.000
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.000
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.000