CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1410161g001
(
Phoenix dactylifera
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PDK_20s1410161g001
T231015_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1410161g001
Homeodomain
11
52
AGLFKECPHPDEKQRQELSRRLNLEGRQVKFWFQNRRTQMKT
Links
Other
Homeodomain
family TFs
Other
Phoenix dactylifera
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_6DL_D722B6E13
Triticum aestivum
Traes_6DL_D722B6E13
N
0.844
LjT36I04.40.nd
Lotus japonicus
LjT36I04.40.nd
N
0.844
OLONG_012459
Oryza longistaminata
OLONG_012459
N
0.822
BRADI3G23370
Brachypodium distachyon
BRADI3G23370
N
0.821
gene23926-v1.0-hybrid
Fragaria vesca
gene23926-v1.0-hybrid
N
0.812
PDK_20s1347391g002
Phoenix dactylifera
PDK_20s1347391g002
N
0.812
GRMZM2G004334
Zea mays
GRMZM2G004334
N
0.810
OLONG_008306
Oryza longistaminata
OLONG_008306
N
0.810
POPTR_0012s03550
Populus trichocarpa
POPTR_0012s03550
N
0.810
cassava13400.valid.m1
Manihot esculenta
cassava13400.valid.m1
N
0.810
mgf006959m
Mimulus guttatus
mgf006959m
N
0.810
F775_10961
Aegilops tauschii
F775_10961
N
0.804
GRMZM2G123140
Zea mays
GRMZM2G123140
I
0.800
Traes_1DL_9FB53E48A
Triticum aestivum
Traes_1DL_9FB53E48A
N
0.800
MDP0000690933
Malus domestica
MDP0000690933
N
0.800
PGSC0003DMG400013263
Solanum tuberosum
PGSC0003DMG400013263
N
0.798
GSMUA_Achr3G23090_001
Musa acuminata
GSMUA_Achr3G23090_001
N
0.790
Pavir.Fa02028
Panicum virgatum
Pavir.Fa02028
N
0.790
Carubv10007218m.g
Capsella rubella
Carubv10007218m.g
N
0.783
Traes_6BL_4301B7F15
Triticum aestivum
Traes_6BL_4301B7F15
N
0.776
OLONG_017944
Oryza longistaminata
OLONG_017944
N
0.772
OS01G0788800
Oryza sativa
OS01G0788800
N
0.772
TCM_016582
Theobroma cacao
TCM_016582
I
0.768
Gorai.003G184900
Gossypium raimondii
Gorai.003G184900
I
0.768
Ca_08015
Cicer arietinum
Ca_08015
N
0.763
PGSC0003DMG400019030
Solanum tuberosum
PGSC0003DMG400019030
N
0.752
OMERI08G08060
Oryza meridionalis
OMERI08G08060
N
0.743
BRADI2G50510
Brachypodium distachyon
BRADI2G50510
N
0.732
gene25833-v1.0-hybrid
Fragaria vesca
gene25833-v1.0-hybrid
N
0.732
GLYMA08G09430
Glycine max
GLYMA08G09430
N
0.726
Traes_3AL_F42853DA5
Triticum aestivum
Traes_3AL_F42853DA5
N
0.719
TRIUR3_32002
Triticum urartu
TRIUR3_32002
N
0.707
Bo1g131210
Brassica oleracea
Bo1g131210
N
0.703
TRAES3BF096700010CFD_g
Triticum aestivum
TRAES3BF096700010CFD_g
N
0.694
Ocbimv22024994m.g
Octopus bimaculoides
Ocbimv22024994m.g
N
0.693
csin109617
Clonorchis sinensis
csin109617
N
0.689
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
N
0.688
ENSOCUG00000013528
Oryctolagus cuniculus
ENSOCUG00000013528
I
0.686
TRIUR3_29318
Triticum urartu
TRIUR3_29318
N
0.686
PGSC0003DMG400007775
Solanum tuberosum
PGSC0003DMG400007775
N
0.684
nRc.2.0.1.g21365
Romanomermis culicivorax
nRc.2.0.1.g21365
N
0.681
GI23625
Drosophila mojavensis
FBgn0146351
N
0.678
TRAES3BF096700040CFD_g
Triticum aestivum
TRAES3BF096700040CFD_g
N
0.678
scaffold61-EXSNAP2012.75
Pristionchus exspectatus
scaffold61-EXSNAP2012.75
N
0.675
Ca_19697
Cicer arietinum
Ca_19697
N
0.673
ENSPTRG00000017522
Pan troglodytes
ENSPTRG00000017522
N
0.672
TLX3
Taeniopygia guttata
ENSTGUG00000014966
N
0.672
Minc02159
Meloidogyne incognita
Minc02159
N
0.672
ACAC_0000093601
Angiostrongylus cantonensis
ACAC_0000093601
N
0.672
ACOC_0000334101
Angiostrongylus costaricensis
ACOC_0000334101
N
0.672
ANCCAN_27026
Ancylostoma caninum
ANCCAN_27026
N
0.672
ANCCEY_10891
Ancylostoma ceylanicum
ANCCEY_10891
N
0.672
SMTD_0001030501
Schistosoma mattheei
SMTD_0001030501
N
0.672
PPA28666
Pristionchus pacificus
PPA28666
N
0.667
YQE_10731
Dendroctonus ponderosae
YQE_10731
N
0.667
AEPI010666
Anopheles epiroticus
AEPI010666
N
0.666
AQUA015309
Anopheles quadriannulatus
AQUA015309
N
0.666
PHUM359880
Pediculus humanus
PHUM359880
N
0.665
SINV22981
Solenopsis invicta
SINV22981
N
0.665
VAX1
Loxodonta africana
ENSLAFG00000018107
N
0.660
ENSSHAG00000009294
Sarcophilus harrisii
ENSSHAG00000009294
I
0.657
ENSTRUG00000017602
Takifugu rubripes
ENSTRUG00000017602
N
0.656
LDEC017208
Leptinotarsa decemlineata
LDEC017208
N
0.653
ASTEI00742
Anopheles stephensi
ASTEI00742
N
0.653
EMX1
Oryctolagus cuniculus
ENSOCUG00000008208
N
0.651
HelroG192586
Helobdella robusta
HelroG192586
N
0.651
PHUM118950
Pediculus humanus
PHUM118950
N
0.651
AFAF006159
Anopheles farauti
AFAF006159
I
0.651
nRc.2.0.1.g08298
Romanomermis culicivorax
nRc.2.0.1.g08298
N
0.651
SNAPOd2T00015975001
Oikopleura dioica
SNAPOd2T00015975001
N
0.646
ACEP22770
Atta cephalotes
ACEP22770
N
0.645
ACYPI086517
Acyrthosiphon pisum
ACYPI086517
N
0.645
tlx2
Danio rerio
ENSDARG00000011273
I
0.645
NKX6-1
Homo sapiens
ENSG00000163623
D
0.645
Tlx1
Mus musculus
ENSMUSG00000025215
I
0.645
ENSOARG00000003161
Ovis aries
ENSOARG00000003161
I
0.645
VAX2
Sus scrofa
ENSSSCG00000008318
N
0.645
ENSTNIG00000016273
Tetraodon nigroviridis
ENSTNIG00000016273
I
0.645
ENSXMAG00000003902
Xiphophorus maculatus
ENSXMAG00000003902
I
0.645
ISCW010454
Ixodes scapularis
ISCW010454
N
0.645
ISCW012145
Ixodes scapularis
ISCW012145
N
0.645
KGM_17085
Danaus plexippus
KGM_17085
N
0.645
MCINX004708
Melitaea cinxia
MCINX004708
N
0.645
MESCA006388
Megaselia scalaris
MESCA006388
N
0.645
PHUM359910
Pediculus humanus
PHUM359910
N
0.645
RPRC003713
Rhodnius prolixus
RPRC003713
N
0.645
YQE_12889
Dendroctonus ponderosae
YQE_12889
N
0.645
Cmyd_10007464
Chelonia mydas
Cmyd_10007464
I
0.645
LDEC009173
Leptinotarsa decemlineata
LDEC009173
N
0.645
Sjc_0085440
Schistosoma japonicum
Sjc_0085440
N
0.645
SMU15011671
Schmidtea mediterranea
SMU15011671
I
0.645
nkx6-1
Xenopus tropicalis
XB-GENE-483574
I
0.645
ACUA011088
Anopheles culicifacies
ACUA011088
N
0.645
AEPI002733
Anopheles epiroticus
AEPI002733
N
0.645
AMAM008009
Anopheles maculatus
AMAM008009
N
0.645
PPAI004705
Phlebotomus papatasi
PPAI004705
N
0.645
PPAI006607
Phlebotomus papatasi
PPAI006607
I
0.645
BTMF_0001416601
Brugia timori
BTMF_0001416601
N
0.645
nDi.2.2.2.g10664
Dirofilaria immitis
nDi.2.2.2.g10664
I
0.645
PXEA_0003635301
Protopolystoma xenopodis
PXEA_0003635301
N
0.645
SPER_0001142801
Spirometra erinaceieuropaei
SPER_0001142801
I
0.645
TCLT_0000655201
Thelazia callipaeda
TCLT_0000655201
I
0.645
TRE_0000385401
Trichobilharzia regenti
TRE_0000385401
N
0.645
ENSOARG00000010209
Ovis aries
ENSOARG00000010209
N
0.640
ENSPVAG00000007998
Pteropus vampyrus
ENSPVAG00000007998
N
0.640
SPU_022574
Strongylocentrotus purpuratus
SPU_022574
N
0.637
Tal_R011355
Tyto alba
Tal_R011355
N
0.637
TRIUR3_33331
Triticum urartu
TRIUR3_33331
N
0.636
ACHR008505
Anopheles christyi
ACHR008505
N
0.634
ACUA020431
Anopheles culicifacies
ACUA020431
N
0.634
AEPI010384
Anopheles epiroticus
AEPI010384
N
0.634
AFUN002980
Anopheles funestus
AFUN002980
N
0.632
hoxc12a
Gasterosteus aculeatus
ENSGACG00000009391
N
0.631
ASIM_0000060401
Anisakis simplex
ASIM_0000060401
N
0.631
ASIM_0001450801
Anisakis simplex
ASIM_0001450801
N
0.631
maker-nMf.1.1.scaf28435-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf28435-augustus-gene-0.3
N
0.630
M378DRAFT_56764
Amanita muscaria
M378DRAFT_56764
N
0.626
ANCCAN_14745
Ancylostoma caninum
ANCCAN_14745
N
0.626
DICVIV_01479
Dictyocaulus viviparus
DICVIV_01479
N
0.626
HMEL006102
Heliconius melpomene
HMEL006102
N
0.624
BGIBMGA010052
Bombyx mori
BGIBMGA010052
N
0.623
DICVIV_02944
Dictyocaulus viviparus
DICVIV_02944
N
0.623
K443DRAFT_111002
Laccaria amethystina
K443DRAFT_111002
N
0.622
LACBIDRAFT_243459
Laccaria bicolor
LACBIDRAFT_243459
N
0.622
LOAG_18696
Loa loa
LOAG_18696
N
0.621
AMIN006246
Anopheles minimus
AMIN006246
N
0.621
PPAI007203
Phlebotomus papatasi
PPAI007203
N
0.621
ECPE_0000357901
Echinostoma caproni
ECPE_0000357901
N
0.621
nOo.2.0.1.g12002
Onchocerca ochengi
nOo.2.0.1.g12002
N
0.621
maker-nMf.1.1.scaf05303-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf05303-snap-gene-0.8
N
0.619
EEL_0000533501
Elaeophora elaphi
EEL_0000533501
N
0.618
GPUH_0000797801
Gongylonema pulchrum
GPUH_0000797801
N
0.618
TCNE_0000505101
Toxocara canis
TCNE_0000505101
N
0.618
BGLB006778
Biomphalaria glabrata
BGLB006778
N
0.617
ENSCSAG00000006765
Chlorocebus sabaeus
ENSCSAG00000006765
N
0.616
ENSECAG00000002506
Equus caballus
ENSECAG00000002506
I
0.616
HMX2
Felis catus
ENSFCAG00000023440
N
0.616
ENSFCAG00000025984
Felis catus
ENSFCAG00000025984
N
0.616
Alligator_sinensis_CCG004967.1
Alligator sinensis
Alligator_sinensis_CCG004967.1
N
0.616
ANCCAN_11756
Ancylostoma caninum
ANCCAN_11756
N
0.616
CLEC004114
Cimex lectularius
CLEC004114
N
0.615
Minc14799
Meloidogyne incognita
Minc14799
N
0.614
BTMF_0000546301
Brugia timori
BTMF_0000546301
N
0.614
SPER_0001728701
Spirometra erinaceieuropaei
SPER_0001728701
N
0.614
DME_0000044501
Dracunculus medinensis
DME_0000044501
N
0.613
NECAME_08983
Necator americanus
NECAME_08983
N
0.613
CpipJ_CPIJ001378
Culex pipiens
CpipJ_CPIJ001378
N
0.612
Bm8478
Brugia malayi
Bm8478
N
0.612
CJA40511
Caenorhabditis japonica
CJA40511
I
0.612
CPIJ001378
Culex quinquefasciatus
CPIJ001378
N
0.612
ENSACAG00000000961
Anolis carolinensis
ENSACAG00000000961
N
0.612
ENSACAG00000005787
Anolis carolinensis
ENSACAG00000005787
N
0.612
ENSACAG00000027662
Anolis carolinensis
ENSACAG00000027662
I
0.612
NKX6-3
Canis familiaris
ENSCAFG00000005710
N
0.612
ENSCJAG00000004205
Callithrix jacchus
ENSCJAG00000004205
I
0.612
NKX6-3
Homo sapiens
ENSG00000165066
D
0.612
ENSMEUG00000015794
Macropus eugenii
ENSMEUG00000015794
I
0.612
ENSMMUG00000014725
Macaca mulatta
ENSMMUG00000014725
N
0.612
ENSOANG00000003475
Ornithorhynchus anatinus
ENSOANG00000003475
I
0.612
ENSPANG00000014739
Papio anubis
ENSPANG00000014739
N
0.612
ENSPCAG00000005898
Procavia capensis
ENSPCAG00000005898
N
0.612
ENSPPYG00000018545
Pongo abelii
ENSPPYG00000018545
N
0.612
NKX6-3
Tursiops truncatus
ENSTTRG00000003567
N
0.612
GRMZM2G381748
Zea mays
GRMZM2G381748
N
0.612
LOAG_07462
Loa loa
LOAG_07462
N
0.612
PPA04715
Pristionchus pacificus
PPA04715
N
0.612
Cmyd_10012338
Chelonia mydas
Cmyd_10012338
N
0.612
CLEC002615
Cimex lectularius
CLEC002615
N
0.612
LCUP008695
Lucilia cuprina
LCUP008695
N
0.612
AALB008451
Anopheles albimanus
AALB008451
N
0.612
AARA004444
Anopheles arabiensis
AARA004444
N
0.612
ADIR006385
Anopheles dirus
ADIR006385
N
0.612
AMEM011598
Anopheles merus
AMEM011598
N
0.612
AMIN002696
Anopheles minimus
AMIN002696
N
0.612
AQUA009533
Anopheles quadriannulatus
AQUA009533
N
0.612
SMRZ_0000903001
Schistosoma margrebowiei
SMRZ_0000903001
N
0.612
SROB_0001009601
Schistosoma rodhaini
SROB_0001009601
N
0.612
HOXB2
Pan troglodytes
ENSPTRG00000009352
I
0.611
ISCW012461
Ixodes scapularis
ISCW012461
N
0.611
Tal_R008067
Tyto alba
Tal_R008067
I
0.611
hoxb2.S
Xenopus laevis
XB-GENE-478530
I
0.611
AATE009299
Anopheles atroparvus
AATE009299
I
0.611
AMEM007254
Anopheles merus
AMEM007254
N
0.611
HNAJ_0000607701
Hymenolepis nana
HNAJ_0000607701
N
0.611
SBAD_0000495201
Soboliphyme baturini
SBAD_0000495201
N
0.611
T265_14387
Opisthorchis viverrini
T265_14387
N
0.611
NEMVEDRAFT_v1g101680
Nematostella vectensis
NEMVEDRAFT_v1g101680
N
0.610
SVUK_0001081801
Strongylus vulgaris
SVUK_0001081801
N
0.610
TLX2
Ochotona princeps
ENSOPRG00000014031
N
0.609
LDEC016573
Leptinotarsa decemlineata
LDEC016573
N
0.609
ANCCAN_23849
Ancylostoma caninum
ANCCAN_23849
N
0.609
WUBG_03180
Wuchereria bancrofti
WUBG_03180
N
0.608
GH13586
Drosophila grimshawi
FBgn0121062
N
0.608
KGM_15359
Danaus plexippus
KGM_15359
N
0.608
HHAL004742-PA
Halyomorpha halys
HHAL004742-PA
N
0.608
ANCCAN_18983
Ancylostoma caninum
ANCCAN_18983
N
0.608
ANCCEY_10591
Ancylostoma ceylanicum
ANCCEY_10591
N
0.608
ANCDUO_04800
Ancylostoma duodenale
ANCDUO_04800
N
0.608
ASIM_0000175201
Anisakis simplex
ASIM_0000175201
N
0.608
ASIM_0000357501
Anisakis simplex
ASIM_0000357501
N
0.608
HPBE_0002651601
Heligmosomoides bakeri
HPBE_0002651601
N
0.608
NECAME_11765
Necator americanus
NECAME_11765
N
0.608
SMTD_0001153001
Schistosoma mattheei
SMTD_0001153001
N
0.608
ENSGALG00000020423
Gallus gallus
ENSGALG00000020423
N
0.607
ENSTGUG00000000339
Taeniopygia guttata
ENSTGUG00000000339
N
0.607
DICVIV_09128
Dictyocaulus viviparus
DICVIV_09128
N
0.607
SPAL_0000530600
Strongyloides papillosus
SPAL_0000530600
N
0.607
LDEC004784
Leptinotarsa decemlineata
LDEC004784
N
0.606
A_05714
Schistosoma haematobium
A_05714
N
0.606
NBR_0000086301
Nippostrongylus brasiliensis
NBR_0000086301
N
0.606
Alligator_sinensis_CCG010660.1
Alligator sinensis
Alligator_sinensis_CCG010660.1
N
0.605
BGLB007768
Biomphalaria glabrata
BGLB007768
N
0.605
BGLB011885
Biomphalaria glabrata
BGLB011885
N
0.605
TRE_0000162501
Trichobilharzia regenti
TRE_0000162501
N
0.605
ENSSHAG00000011988
Sarcophilus harrisii
ENSSHAG00000011988
I
0.604
WUBG_09511
Wuchereria bancrofti
WUBG_09511
N
0.603
BGIBMGA003265
Bombyx mori
BGIBMGA003265
N
0.603
CGI_10026625
Crassostrea gigas
CGI_10026625
N
0.603
ENSMGAG00000010685
Meleagris gallopavo
ENSMGAG00000010685
I
0.603
ENSMLUG00000022220
Myotis lucifugus
ENSMLUG00000022220
N
0.603
GBX2
Oryzias latipes
ENSORLG00000001376
I
0.603
F775_01938
Aegilops tauschii
F775_01938
N
0.603
HMEL016138
Heliconius melpomene
HMEL016138
N
0.603
Ocbimv22010205m.g
Octopus bimaculoides
Ocbimv22010205m.g
N
0.603
HHAL009617-PA
Halyomorpha halys
HHAL009617-PA
N
0.603
SNAPOd2T00002147001
Oikopleura dioica
SNAPOd2T00002147001
N
0.603
DILT_0000613101
Diphyllobothrium latum
DILT_0000613101
N
0.603
PEQ_0000993201
Parascaris equorum
PEQ_0000993201
N
0.603
SPER_0001567701
Spirometra erinaceieuropaei
SPER_0001567701
N
0.603
Smp_136900
Schistosoma mansoni
Smp_136900
N
0.602
Tal_R004953
Tyto alba
Tal_R004953
N
0.602
BGLB012524
Biomphalaria glabrata
BGLB012524
N
0.602
BARX2
Ornithorhynchus anatinus
ENSOANG00000000573
N
0.601
TRAES3BF096700070CFD_g
Triticum aestivum
TRAES3BF096700070CFD_g
N
0.601
Cla017350
Citrullus lanatus
Cla017350
N
0.601
AMAM021430
Anopheles maculatus
AMAM021430
N
0.601
BGLB007714
Biomphalaria glabrata
BGLB007714
N
0.601
SCUD_0000383301
Schistosoma curassoni
SCUD_0000383301
N
0.601
WUBG_18725
Wuchereria bancrofti
WUBG_18725
N
0.600
ACEP24283
Atta cephalotes
ACEP24283
N
0.600
ENSAMXG00000008007
Astyanax mexicanus
ENSAMXG00000008007
I
0.600
BARX1
Homo sapiens
ENSG00000131668
D
0.600
ENSMGAG00000009298
Meleagris gallopavo
ENSMGAG00000009298
N
0.600
ENSTSYG00000005123
Tarsius syrichta
ENSTSYG00000005123
N
0.600
ENSXMAG00000013191
Xiphophorus maculatus
ENSXMAG00000013191
N
0.600
Alligator_sinensis_CCG001661.1
Alligator sinensis
Alligator_sinensis_CCG001661.1
I
0.600
Cmyd_10005403
Chelonia mydas
Cmyd_10005403
I
0.600
LLOJ004702
Lutzomyia longipalpis
LLOJ004702
N
0.600