30072.m000927 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 30072.m000927 T226999_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX11
M06916_2.00 		Arabidopsis thaliana
ADTTAATTAVD
HBTAATTAAHT		 Dap-seq
OMalley et al.(2016)
WOX11_col_a 		0.839 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30072.m000927 Homeodomain 24 85

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYB121 Arabidopsis thaliana AT3G30210 D
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I
MYB305 Arabidopsis thaliana AT3G24310 I
AtMYB79 Arabidopsis thaliana AT4G13480 I
BGIOSGA004072 Oryza indica BGIOSGA004072 I
BGIOSGA006030 Oryza indica BGIOSGA006030 I
BGIOSGA011479 Oryza indica BGIOSGA011479 I
BGIOSGA014750 Oryza indica BGIOSGA014750 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo2g057760 Brassica oleracea Bo2g057760 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g088650 Brassica oleracea Bo7g088650 I
Bo9g009020 Brassica oleracea Bo9g009020 I
Bra001941 Brassica rapa Bra001941 I
Bra015029 Brassica rapa Bra015029 I
Bra020744 Brassica rapa Bra020744 I
Bra025410 Brassica rapa Bra025410 I
Bra028369 Brassica rapa Bra028369 I
Bra033948 Brassica rapa Bra033948 I
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I
F775_06959 Aegilops tauschii F775_06959 I
F775_23572 Aegilops tauschii F775_23572 I
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
GLYMA04G26650 Glycine max GLYMA04G26650 I
GLYMA06G38340 Glycine max GLYMA06G38340 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA10G33450 Glycine max GLYMA10G33450 I
GLYMA15G14190 Glycine max GLYMA15G14190 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA18G50881 Glycine max GLYMA18G50881 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
GLYMA20G34140 Glycine max GLYMA20G34140 I
GRMZM2G027697 Zea mays GRMZM2G027697 I
GRMZM2G043792 Zea mays GRMZM2G043792 I
GRMZM2G054111 Zea mays GRMZM2G054111 I
GRMZM2G089686 Zea mays GRMZM2G089686 I
GRMZM2G143328 Zea mays GRMZM2G143328 I
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I
GSMUA_Achr11G17190_001 Musa acuminata GSMUA_Achr11G17190_001 I
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I
LPERR01G20550 Leersia perrieri LPERR01G20550 I
LPERR04G14700 Leersia perrieri LPERR04G14700 I
MLOC_5568 Hordeum vulgare MLOC_5568 I
MLOC_6786 Hordeum vulgare MLOC_6786 I
MLOC_9927 Hordeum vulgare MLOC_9927 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
OB01G33330 Oryza brachyantha OB01G33330 I
OB02G31640 Oryza brachyantha OB02G31640 I
OB03G13340 Oryza brachyantha OB03G13340 I
OB04G25360 Oryza brachyantha OB04G25360 I
OBART01G24030 Oryza barthii OBART01G24030 I
OBART02G24300 Oryza barthii OBART02G24300 I
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I
OMERI01G22060 Oryza meridionalis OMERI01G22060 I
OMERI02G23750 Oryza meridionalis OMERI02G23750 I
ONIVA01G27030 Oryza nivara ONIVA01G27030 I
ONIVA09G12460 Oryza nivara ONIVA09G12460 I
OPUNC01G24010 Oryza punctata OPUNC01G24010 I
OPUNC02G22200 Oryza punctata OPUNC02G22200 I
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I
OS01G0637800 Oryza sativa OS01G0637800 I
OS02G0618400 Oryza sativa OS02G0618400 I
OS03G0142600 Oryza sativa OS03G0142600 I
OS04G0508500 Oryza sativa OS04G0508500 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
Sb01g047450 Sorghum bicolor Sb01g047450 I
Sb03g029050 Sorghum bicolor Sb03g029050 I
Sb04g026210 Sorghum bicolor Sb04g026210 I
Si002446m.g Setaria italica Si002446m.g I
Si003965m.g Setaria italica Si003965m.g I
Si010822m.g Setaria italica Si010822m.g I
Si018007m.g Setaria italica Si018007m.g I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I
TRIUR3_18020 Triticum urartu TRIUR3_18020 I
TRIUR3_25064 Triticum urartu TRIUR3_25064 I
TRIUR3_31527 Triticum urartu TRIUR3_31527 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I
Ca_07872 Cicer arietinum Ca_07872 I
Ca_20437 Cicer arietinum Ca_20437 I
Cla007745 Citrullus lanatus Cla007745 I
Cla016762 Citrullus lanatus Cla016762 I
Cla017610 Citrullus lanatus Cla017610 I
Cla021798 Citrullus lanatus Cla021798 I
Pm009050 Prunus mume Pm009050 I
Pm015392 Prunus mume Pm015392 I
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.383230 Cucumis sativus Cucsa.383230 I
mgf002201m Mimulus guttatus mgf002201m I
mgf004640m Mimulus guttatus mgf004640m I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10018530m.g Capsella rubella Carubv10018530m.g I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I
Gorai.004G146000 Gossypium raimondii Gorai.004G146000 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G060300 Gossypium raimondii Gorai.006G060300 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.007G312400 Gossypium raimondii Gorai.007G312400 I
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10034372.g Linum usitatissimum Lus10034372.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I
Pavir.Ea00964 Panicum virgatum Pavir.Ea00964 I
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I
Pavir.J35999 Panicum virgatum Pavir.J35999 I
Pavir.J37992 Panicum virgatum Pavir.J37992 I
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
chr1.CM0163.50.nc Lotus japonicus chr1.CM0163.50.nc I
F775_32337 Aegilops tauschii F775_32337 N
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N