Eucgr.J00701 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.J00701 T228502_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.729 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J00701.1 Homeodomain 18 74
Eucgr.J00701.2 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK25011.1 Cannabis sativa PK25011.1 D 0.729
Cla008712 Citrullus lanatus Cla008712 I 0.635
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.601
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.714
MDP0000207866 Malus domestica MDP0000207866 I 0.633
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.620
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.714
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.723
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.655
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.622
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.624
Ca_21400 Cicer arietinum Ca_21400 I 0.617
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.701
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.618
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.631
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.622
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.734
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.624
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.734
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.624
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.616