PMAA_076490 (Penicillium marneffei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PMAA_076490 T231039_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.849 0.895
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.627 0.474
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.627 0.474
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.627 0.474
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.627 0.474
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.613 0.421
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.613 0.421
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.613 0.421
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.613 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_076490.t1 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Penicillium marneffei TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
APRR2 Arabidopsis thaliana AT4G18020 D
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I
Carubv10004540m.g Capsella rubella Carubv10004540m.g I
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I
Cucsa.321580 Cucumis sativus Cucsa.321580 I
Cucsa.313480 Cucumis sativus Cucsa.313480 I
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I
30054.m000786 Ricinus communis 30054.m000786 I
Pm014733 Prunus mume Pm014733 I
Cla016403 Citrullus lanatus Cla016403 I
Cla008926 Citrullus lanatus Cla008926 I
Ca_24009 Cicer arietinum Ca_24009 I
Ca_12825 Cicer arietinum Ca_12825 I
Ca_02285 Cicer arietinum Ca_02285 I
APRR2 Vitis vinifera VIT_02s0012g00570 I
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I
TCM_015780 Theobroma cacao TCM_015780 I
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I
PK19826.1 Cannabis sativa PK19826.1 I
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I
MDP0000248863 Malus domestica MDP0000248863 I
MDP0000237396 Malus domestica MDP0000237396 I
Lus10040109.g Linum usitatissimum Lus10040109.g I
Lus10011044.g Linum usitatissimum Lus10011044.g I
Lus10003013.g Linum usitatissimum Lus10003013.g I
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I
MLOC_43537 Hordeum vulgare MLOC_43537 I
LPERR06G12880 Leersia perrieri LPERR06G12880 I
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I
GRMZM2G087804 Zea mays GRMZM2G087804 I
GLYMA17G16360 Glycine max GLYMA17G16360 I
GLYMA11G04441 Glycine max GLYMA11G04441 I
GLYMA05G06070 Glycine max GLYMA05G06070 I
GLYMA01G40900 Glycine max GLYMA01G40900 I
MTR_4g098870 Medicago truncatula MTR_4g098870 I
F775_20285 Aegilops tauschii F775_20285 I
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I
Bra036015 Brassica rapa Bra036015 I
Bra013279 Brassica rapa Bra013279 I
Bra013278 Brassica rapa Bra013278 I
Bra013277 Brassica rapa Bra013277 I
Bra012623 Brassica rapa Bra012623 I
Bo7g105690 Brassica oleracea Bo7g105690 I
Bo1g019180 Brassica oleracea Bo1g019180 I
BGIOSGA022875 Oryza indica BGIOSGA022875 I
GLK1 Oryza sativa OS06G0348800 I
Si006400m.g Setaria italica Si006400m.g I
Si001336m.g Setaria italica Si001336m.g I
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I
Sb10g008400 Sorghum bicolor Sb10g008400 I
Sb03g000400 Sorghum bicolor Sb03g000400 I
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I
OPUNC06G13180 Oryza punctata OPUNC06G13180 I
ONIVA06G16920 Oryza nivara ONIVA06G16920 I
OMERI06G15340 Oryza meridionalis OMERI06G15340 I
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I
OBART03G02540 Oryza barthii OBART03G02540 I
OB06G22250 Oryza brachyantha OB06G22250 I
MTR_5g014040 Medicago truncatula MTR_5g014040 I