CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_044_00072
(
Aquilegia coerulea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Aquca_044_00072
T285616_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.834
0.894
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN
NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.736
0.851
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_044_00072.1
Myb
326
376
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.2
Myb
326
376
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.3
Myb
326
376
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.4
Myb
306
356
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.5
Myb
326
376
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.6
Myb
326
376
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Aquca_044_00072.7
Myb
326
375
KVDWTPDLHKRFVQAVEQLGVDQAIPSRILDLMKVEGLTRHNVASHLQYR
Links
Other
Myb/SANT
family TFs
Other
Aquilegia coerulea
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1585631g001
Phoenix dactylifera
PDK_20s1585631g001
I
0.883
Eucgr.E00308
Eucalyptus grandis
Eucgr.E00308
I
0.860
MDP0000237396
Malus domestica
MDP0000237396
I
0.854
PRUPE_ppa004161mg
Prunus persica
PRUPE_ppa004161mg
I
0.852
TCM_015780
Theobroma cacao
TCM_015780
I
0.852
Pm014733
Prunus mume
Pm014733
I
0.852
Ciclev10031120m.g
Citrus clementina
Ciclev10031120m.g
I
0.852
gene10484-v1.0-hybrid
Fragaria vesca
gene10484-v1.0-hybrid
I
0.852
orange1.1g008254m.g
Citrus sinensis
orange1.1g008254m.g
I
0.852
PK19826.1
Cannabis sativa
PK19826.1
I
0.852
APRR2
Arabidopsis thaliana
AT4G18020
D
0.834
APRR2
Arabidopsis lyrata
fgenesh2_kg.7__2503__AT4G18020.2
I
0.834
30054.m000786
Ricinus communis
30054.m000786
I
0.827
APRR2
Vitis vinifera
VIT_02s0012g00570
I
0.819
Cla008926
Citrullus lanatus
Cla008926
I
0.819
Cucsa.321580
Cucumis sativus
Cucsa.321580
I
0.819
Bo1g019180
Brassica oleracea
Bo1g019180
I
0.811
Bo7g105690
Brassica oleracea
Bo7g105690
I
0.811
Bra012623
Brassica rapa
Bra012623
I
0.811
Bra013277
Brassica rapa
Bra013277
I
0.811
Bra013278
Brassica rapa
Bra013278
I
0.811
Bra013279
Brassica rapa
Bra013279
I
0.811
Bostr.30275s0270
Boechera stricta
Bostr.30275s0270
I
0.811
Thhalv10024919m.g
Eutrema salsugineum
Thhalv10024919m.g
I
0.811
MDP0000248863
Malus domestica
MDP0000248863
I
0.804
cassava2466.valid.m1
Manihot esculenta
cassava2466.valid.m1
I
0.800
Lus10011044.g
Linum usitatissimum
Lus10011044.g
I
0.800
AMTR_s00149p00035260
Amborella trichopoda
AMTR_s00149p00035260
I
0.794
evm.TU.supercontig_6.428
Carica papaya
evm.TU.supercontig_6.428
I
0.792
SapurV1A.1296s0050
Salix purpurea
SapurV1A.1296s0050
I
0.781
Lus10040109.g
Linum usitatissimum
Lus10040109.g
I
0.779
GSMUA_Achr11G17740_001
Musa acuminata
GSMUA_Achr11G17740_001
I
0.778
SapurV1A.0132s0010
Salix purpurea
SapurV1A.0132s0010
I
0.774
PGSC0003DMG400024217
Solanum tuberosum
PGSC0003DMG400024217
I
0.771
Solyc08g077230.2
Solanum lycopersicum
Solyc08g077230.2
I
0.771
Ca_12825
Cicer arietinum
Ca_12825
I
0.771
chr4.CM0831.100.nd
Lotus japonicus
chr4.CM0831.100.nd
I
0.771
Lus10003013.g
Linum usitatissimum
Lus10003013.g
I
0.767
MTR_4g098870
Medicago truncatula
MTR_4g098870
I
0.764
GLYMA05G06070
Glycine max
GLYMA05G06070
I
0.763
Ca_02285
Cicer arietinum
Ca_02285
I
0.763
Gorai.008G228800
Gossypium raimondii
Gorai.008G228800
I
0.763
POPTR_0001s02910
Populus trichocarpa
POPTR_0001s02910
I
0.756
cassava42047.valid.m1
Manihot esculenta
cassava42047.valid.m1
I
0.753
cassava42048.valid.m1
Manihot esculenta
cassava42048.valid.m1
I
0.753
Lus10030938.g
Linum usitatissimum
Lus10030938.g
I
0.752
GLYMA17G16360
Glycine max
GLYMA17G16360
I
0.751
GLYMA01G40900
Glycine max
GLYMA01G40900
I
0.745
GLYMA11G04441
Glycine max
GLYMA11G04441
I
0.745
SELMODRAFT_428906
Selaginella moellendorffii
SELMODRAFT_428906
I
0.745
chr2.CM0021.770.nc
Lotus japonicus
chr2.CM0021.770.nc
I
0.745
Cagra.1595s0002
Capsella grandiflora
Cagra.1595s0002
I
0.744
Carubv10004540m.g
Capsella rubella
Carubv10004540m.g
I
0.744
POPTR_0003s08600
Populus trichocarpa
POPTR_0003s08600
I
0.738
GPRI1
Arabidopsis thaliana
AT2G20570
D
0.736
GPRI1
Arabidopsis lyrata
fgenesh2_kg.3__3588__AT2G20570.1
I
0.736
Cla003791
Citrullus lanatus
Cla003791
I
0.736
Cucsa.087530
Cucumis sativus
Cucsa.087530
I
0.736
Bostr.7903s0106
Boechera stricta
Bostr.7903s0106
I
0.736
Cagra.2516s0014
Capsella grandiflora
Cagra.2516s0014
I
0.736
Carubv10014114m.g
Capsella rubella
Carubv10014114m.g
I
0.736
Lus10018649.g
Linum usitatissimum
Lus10018649.g
I
0.736
Lus10033642.g
Linum usitatissimum
Lus10033642.g
I
0.736
Lus10039883.g
Linum usitatissimum
Lus10039883.g
I
0.736
MTR_5g014040
Medicago truncatula
MTR_5g014040
I
0.729
Gorai.004G188300
Gossypium raimondii
Gorai.004G188300
I
0.729
Cucsa.313480
Cucumis sativus
Cucsa.313480
I
0.724
Gorai.003G180100
Gossypium raimondii
Gorai.003G180100
I
0.723
AMTR_s00058p00133630
Amborella trichopoda
AMTR_s00058p00133630
I
0.716
POPTR_0007s01230
Populus trichocarpa
POPTR_0007s01230
I
0.716
POPTR_0017s04720
Populus trichocarpa
POPTR_0017s04720
I
0.716
PRUPE_ppa014599mg
Prunus persica
PRUPE_ppa014599mg
I
0.716
TCM_008193
Theobroma cacao
TCM_008193
I
0.716
Pm014123
Prunus mume
Pm014123
I
0.716
29983.m003131
Ricinus communis
29983.m003131
I
0.716
cassava43649.valid.m1
Manihot esculenta
cassava43649.valid.m1
I
0.716
cassava43650.valid.m1
Manihot esculenta
cassava43650.valid.m1
I
0.716
Ciclev10015266m.g
Citrus clementina
Ciclev10015266m.g
I
0.716
gene17750-v1.0-hybrid
Fragaria vesca
gene17750-v1.0-hybrid
I
0.716
Gorai.002G020300
Gossypium raimondii
Gorai.002G020300
I
0.716
Gorai.012G126600
Gossypium raimondii
Gorai.012G126600
I
0.716
MDP0000225179
Malus domestica
MDP0000225179
I
0.716
MDP0000526864
Malus domestica
MDP0000526864
I
0.716
orange1.1g013528m.g
Citrus sinensis
orange1.1g013528m.g
I
0.716
SapurV1A.0118s0260
Salix purpurea
SapurV1A.0118s0260
I
0.716
SapurV1A.0693s0070
Salix purpurea
SapurV1A.0693s0070
I
0.716
SapurV1A.1950s0030
Salix purpurea
SapurV1A.1950s0030
I
0.716
PK27491.1
Cannabis sativa
PK27491.1
I
0.716
cassava9823.m1
Manihot esculenta
cassava9823.m1
I
0.701
estExt_gwp_gw1.C_310256
Physcomitrella patens
estExt_gwp_gw1.C_310256
I
0.701
fgenesh1_pm.scaffold_311000005
Physcomitrella patens
fgenesh1_pm.scaffold_311000005
I
0.701
GLYMA06G44330
Glycine max
GLYMA06G44330
I
0.698
GLYMA12G13430
Glycine max
GLYMA12G13430
I
0.698
GLYMA12G33430
Glycine max
GLYMA12G33430
I
0.698
GLYMA13G37010
Glycine max
GLYMA13G37010
I
0.698
MTR_2g090675
Medicago truncatula
MTR_2g090675
I
0.698
MTR_4g078810
Medicago truncatula
MTR_4g078810
I
0.698
PGSC0003DMG400009378
Solanum tuberosum
PGSC0003DMG400009378
I
0.698
Solyc07g053630.2
Solanum lycopersicum
Solyc07g053630.2
I
0.698
GPRI1
Vitis vinifera
VIT_12s0028g03100
I
0.698
Ca_02452
Cicer arietinum
Ca_02452
I
0.698
Ca_11268
Cicer arietinum
Ca_11268
I
0.698
Ca_24009
Cicer arietinum
Ca_24009
I
0.696
mgf004257m
Mimulus guttatus
mgf004257m
I
0.694
GSMUA_Achr2G18200_001
Musa acuminata
GSMUA_Achr2G18200_001
I
0.692
Cla016403
Citrullus lanatus
Cla016403
I
0.689
Thhalv10001986m.g
Eutrema salsugineum
Thhalv10001986m.g
I
0.687
mgf007181m
Mimulus guttatus
mgf007181m
I
0.685
mgf012846m
Mimulus guttatus
mgf012846m
I
0.685
PDK_20s1662851g001
Phoenix dactylifera
PDK_20s1662851g001
I
0.683
chr3.CM0160.680.nd
Lotus japonicus
chr3.CM0160.680.nd
I
0.676
PGSC0003DMG400026587
Solanum tuberosum
PGSC0003DMG400026587
I
0.675
Solyc06g061030.2
Solanum lycopersicum
Solyc06g061030.2
I
0.675
GLK2
Arabidopsis thaliana
AT5G44190
I
0.669
fgenesh2_kg.8__391__AT5G44190.1
Arabidopsis lyrata
fgenesh2_kg.8__391__AT5G44190.1
I
0.669
Bostr.3148s0040
Boechera stricta
Bostr.3148s0040
I
0.669
Cagra.0381s0008
Capsella grandiflora
Cagra.0381s0008
I
0.669
Carubv10026528m.g
Capsella rubella
Carubv10026528m.g
I
0.669
Thhalv10003223m.g
Eutrema salsugineum
Thhalv10003223m.g
I
0.669
Eucgr.K01056
Eucalyptus grandis
Eucgr.K01056
I
0.665