fgenesh1_pm.scaffold_311000005 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pm.scaffold_311000005 T284932_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.777 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.scaffold_311000005 Myb 224 274

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.813
estExt_gwp_gw1.C_310256 Physcomitrella patens estExt_gwp_gw1.C_310256 I 0.813
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.798
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.798
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.798
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.798
TCM_008193 Theobroma cacao TCM_008193 I 0.798
Pm014123 Prunus mume Pm014123 I 0.798
29983.m003131 Ricinus communis 29983.m003131 I 0.798
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.798
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.798
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.798
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.798
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.798
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.798
MDP0000225179 Malus domestica MDP0000225179 I 0.798
MDP0000526864 Malus domestica MDP0000526864 I 0.798
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.798
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.798
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.798
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.798
PK27491.1 Cannabis sativa PK27491.1 I 0.798
GLYMA06G44330 Glycine max GLYMA06G44330 I 0.780
GLYMA12G13430 Glycine max GLYMA12G13430 I 0.780
GLYMA12G33430 Glycine max GLYMA12G33430 I 0.780
GLYMA13G37010 Glycine max GLYMA13G37010 I 0.780
MTR_2g090675 Medicago truncatula MTR_2g090675 I 0.780
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I 0.780
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I 0.780
GPRI1 Vitis vinifera VIT_12s0028g03100 I 0.780
Ca_02452 Cicer arietinum Ca_02452 I 0.780
Ca_11268 Cicer arietinum Ca_11268 I 0.780
GPRI1 Arabidopsis thaliana AT2G20570 D 0.777
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.777
Cla003791 Citrullus lanatus Cla003791 I 0.777
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.777
mgf004257m Mimulus guttatus mgf004257m I 0.777
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.777
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.777
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.777
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.777
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.777
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.777
MTR_4g078810 Medicago truncatula MTR_4g078810 I 0.769
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.759
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I 0.759
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.736
mgf007181m Mimulus guttatus mgf007181m I 0.731
mgf012846m Mimulus guttatus mgf012846m I 0.731
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.727
PDK_20s1662851g001 Phoenix dactylifera PDK_20s1662851g001 I 0.724
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.713
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.709
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.709
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.709
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.709
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.709
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.709
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.709
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.709
GLK2 Oryza sativa OS01G0239000 I 0.709
Aquca_051_00026 Aquilegia coerulea Aquca_051_00026 I 0.709
Eucgr.A01857 Eucalyptus grandis Eucgr.A01857 I 0.709
Gorai.008G155000 Gossypium raimondii Gorai.008G155000 I 0.709
Bo7g003410 Brassica oleracea Bo7g003410 I 0.704
Bo8g102300 Brassica oleracea Bo8g102300 I 0.704
Bra031129 Brassica rapa Bra031129 I 0.704
mgf014879m Mimulus guttatus mgf014879m I 0.703
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.701
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.697
TRAES3BF062500050CFD_g Triticum aestivum TRAES3BF062500050CFD_g I 0.697
GRMZM2G087804 Zea mays GRMZM2G087804 I 0.691
Sb03g000400 Sorghum bicolor Sb03g000400 I 0.691
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I 0.691
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.688
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I 0.683
BGIOSGA022875 Oryza indica BGIOSGA022875 I 0.679
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I 0.679
F775_20285 Aegilops tauschii F775_20285 I 0.679
LPERR06G12880 Leersia perrieri LPERR06G12880 I 0.679
MLOC_43537 Hordeum vulgare MLOC_43537 I 0.679
OB06G22250 Oryza brachyantha OB06G22250 I 0.679
OBART03G02540 Oryza barthii OBART03G02540 I 0.679
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I 0.679
OMERI06G15340 Oryza meridionalis OMERI06G15340 I 0.679
ONIVA06G16920 Oryza nivara ONIVA06G16920 I 0.679
OPUNC06G13180 Oryza punctata OPUNC06G13180 I 0.679
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I 0.679
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I 0.679
GLK1 Oryza sativa OS06G0348800 I 0.679
Sb10g008400 Sorghum bicolor Sb10g008400 I 0.679
Si001336m.g Setaria italica Si001336m.g I 0.679
Si006400m.g Setaria italica Si006400m.g I 0.679
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I 0.679
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I 0.679
GSMUA_Achr6G05850_001 Musa acuminata GSMUA_Achr6G05850_001 I 0.678
Cla008926 Citrullus lanatus Cla008926 I 0.678
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.678
BGIOSGA002040 Oryza indica BGIOSGA002040 I 0.676
MLOC_65876 Hordeum vulgare MLOC_65876 I 0.676
ORGLA01G0079000 Oryza glaberrima ORGLA01G0079000 I 0.676
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.664