CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0001233101
(
Schistosoma mattheei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SMTD_0001233101
T236141_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001233101-mRNA-1
Homeodomain
3
24
NIVKCSVQFPVWFQNRRAKYRK
Links
Other
Homeodomain
family TFs
Other
Schistosoma mattheei
TFs
811 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD13
Arabidopsis thaliana
AT2G30340
D
0.000
TCM_045438
Theobroma cacao
TCM_045438
I
0.000
chr2.CM1032.110.nc
Lotus japonicus
chr2.CM1032.110.nc
I
0.000
Traes_1AS_43FB6A3CF
Triticum aestivum
Traes_1AS_43FB6A3CF
I
0.000
Traes_1BS_8F922CA93
Triticum aestivum
Traes_1BS_8F922CA93
I
0.000
Traes_1DS_BB8508CC6
Triticum aestivum
Traes_1DS_BB8508CC6
I
0.000
TRIUR3_18328
Triticum urartu
TRIUR3_18328
I
0.000
LBD15
Vitis vinifera
VIT_13s0067g02380
I
0.000
Ca_04126
Cicer arietinum
Ca_04126
I
0.000
29729.m002335
Ricinus communis
29729.m002335
I
0.000
cassava15554.m1
Manihot esculenta
cassava15554.m1
I
0.000
mgf020556m
Mimulus guttatus
mgf020556m
I
0.000
Aquca_005_00169
Aquilegia coerulea
Aquca_005_00169
I
0.000
Bostr.23794s0013
Boechera stricta
Bostr.23794s0013
I
0.000
Bostr.24513s0205
Boechera stricta
Bostr.24513s0205
I
0.000
Cagra.0567s0001
Capsella grandiflora
Cagra.0567s0001
I
0.000
Cagra.1642s0010
Capsella grandiflora
Cagra.1642s0010
I
0.000
Carubv10024002m.g
Capsella rubella
Carubv10024002m.g
I
0.000
evm.TU.supercontig_19.92
Carica papaya
evm.TU.supercontig_19.92
I
0.000
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
0.000
Gorai.003G151800
Gossypium raimondii
Gorai.003G151800
I
0.000
Lus10009930.g
Linum usitatissimum
Lus10009930.g
I
0.000
Lus10024183.g
Linum usitatissimum
Lus10024183.g
I
0.000
MDP0000167580
Malus domestica
MDP0000167580
I
0.000
Pavir.Ca01098
Panicum virgatum
Pavir.Ca01098
I
0.000
Pavir.Ea03276
Panicum virgatum
Pavir.Ea03276
I
0.000
Pavir.J00291
Panicum virgatum
Pavir.J00291
I
0.000
Thhalv10017073m.g
Eutrema salsugineum
Thhalv10017073m.g
I
0.000
PK05388.1
Cannabis sativa
PK05388.1
I
0.000
PK21617.1
Cannabis sativa
PK21617.1
I
0.000
AMTR_s00007p00227160
Amborella trichopoda
AMTR_s00007p00227160
I
0.000
LPERR05G04040
Leersia perrieri
LPERR05G04040
I
0.000
LBD15
Arabidopsis thaliana
AT2G40470
I
0.000
BGIOSGA018747
Oryza indica
BGIOSGA018747
I
0.000
Bo3g034980
Brassica oleracea
Bo3g034980
I
0.000
Bo4g059520
Brassica oleracea
Bo4g059520
I
0.000
Bo4g172950
Brassica oleracea
Bo4g172950
I
0.000
Bra000188
Brassica rapa
Bra000188
I
0.000
Bra018320
Brassica rapa
Bra018320
I
0.000
Bra021627
Brassica rapa
Bra021627
I
0.000
BRADI2G34520
Brachypodium distachyon
BRADI2G34520
I
0.000
F775_52636
Aegilops tauschii
F775_52636
I
0.000
LBD13
Arabidopsis lyrata
fgenesh2_kg.4__1005__AT2G30340.1
I
0.000
LBD15
Arabidopsis lyrata
fgenesh2_kg.4__2164__AT2G40470.1
I
0.000
GRMZM5G868471
Zea mays
GRMZM5G868471
I
0.000
GSMUA_Achr11G08330_001
Musa acuminata
GSMUA_Achr11G08330_001
I
0.000
TCM_042262
Theobroma cacao
TCM_042262
I
0.000
MLOC_56075
Hordeum vulgare
MLOC_56075
I
0.000
OB05G14280
Oryza brachyantha
OB05G14280
I
0.000
OBART05G04570
Oryza barthii
OBART05G04570
I
0.000
OGLUM05G04450
Oryza glumaepatula
OGLUM05G04450
I
0.000
OMERI05G04500
Oryza meridionalis
OMERI05G04500
I
0.000
ONIVA05G04920
Oryza nivara
ONIVA05G04920
I
0.000
ORGLA05G0042200
Oryza glaberrima
ORGLA05G0042200
I
0.000
ORUFI05G04770
Oryza rufipogon
ORUFI05G04770
I
0.000
OS05G0165450
Oryza sativa
OS05G0165450
I
0.000
PRUPE_ppa011757mg
Prunus persica
PRUPE_ppa011757mg
I
0.000
Sb03g038410
Sorghum bicolor
Sb03g038410
I
0.000
Sb09g004940
Sorghum bicolor
Sb09g004940
I
0.000
Si012018m.g
Setaria italica
Si012018m.g
I
0.000