OB05G14280 (Oryza brachyantha)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OB05G14280 T245510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.885 0.885
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.885 0.885
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.736 0.736
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G14280.1 LOB 15 110

Links

Other LOB family TFs
Other Oryza brachyantha TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.989
OS05G0165450 Oryza sativa OS05G0165450 I 0.989
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.989
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.989
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.989
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.989
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.989
OBART05G04570 Oryza barthii OBART05G04570 I 0.989
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.977
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.977
F775_52636 Aegilops tauschii F775_52636 I 0.977
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.977
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.977
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.977
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.977
Si012018m.g Setaria italica Si012018m.g I 0.966
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.959
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.954
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.954
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.954
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.943
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.920
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.920
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.920
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.920
Bra000188 Brassica rapa Bra000188 I 0.920
LBD15 Arabidopsis thaliana AT2G40470 I 0.920
Bo3g034980 Brassica oleracea Bo3g034980 I 0.920
PK21617.1 Cannabis sativa PK21617.1 I 0.913
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.908
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.908
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.908
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.908
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.908
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.908
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.908
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.908
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.908
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.908
TCM_045438 Theobroma cacao TCM_045438 I 0.908
Bo4g012620 Brassica oleracea Bo4g012620 I 0.897
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.897
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.897
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.897
Bra004572 Brassica rapa Bra004572 I 0.897
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.897
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.897
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.897
Bo4g190210 Brassica oleracea Bo4g190210 I 0.897
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.885
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.885
mgf020556m Mimulus guttatus mgf020556m I 0.885
OS01G0825000 Oryza sativa OS01G0825000 I 0.885
Cla007391 Citrullus lanatus Cla007391 I 0.885
Si004575m.g Setaria italica Si004575m.g I 0.885
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.885
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.885
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.885
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.885
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.885
OBART01G35680 Oryza barthii OBART01G35680 I 0.885
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.885
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.885
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.885
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.885
Bo4g059520 Brassica oleracea Bo4g059520 I 0.885
LBD13 Arabidopsis thaliana AT2G30340 D 0.885
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.885
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.885
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.885
Bra021627 Brassica rapa Bra021627 I 0.885
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.885
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.885
Bo4g172950 Brassica oleracea Bo4g172950 I 0.885
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.885
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.885
Bra016992 Brassica rapa Bra016992 I 0.885
Bra018320 Brassica rapa Bra018320 I 0.885
MDP0000278334 Malus domestica MDP0000278334 I 0.874
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.874
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.874
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.874
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.874
F775_25790 Aegilops tauschii F775_25790 I 0.874
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.874
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.874
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.874
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.874
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.874
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.874
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.874
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.862
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.862
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.862
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.862
29957.m001411 Ricinus communis 29957.m001411 I 0.851
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.851
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.839
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.839
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.828
PK17217.1 Cannabis sativa PK17217.1 I 0.798
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.798
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.798
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.798
Ca_04126 Cicer arietinum Ca_04126 I 0.798
29729.m002335 Ricinus communis 29729.m002335 I 0.788
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.788
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.788
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.788
TCM_042262 Theobroma cacao TCM_042262 I 0.788
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.788
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.788
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.778
OB01G44400 Oryza brachyantha OB01G44400 I 0.778
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.778
Ca_12420 Cicer arietinum Ca_12420 I 0.778
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.778
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.770
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.770
mgf011471m Mimulus guttatus mgf011471m I 0.768
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.768
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.768
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.768
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.768
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.759
Cla013678 Citrullus lanatus Cla013678 I 0.759
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.759
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.759
mgf026046m Mimulus guttatus mgf026046m I 0.759
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.759
PK11564.1 Cannabis sativa PK11564.1 I 0.759
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.759
Si037583m.g Setaria italica Si037583m.g I 0.759
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.759
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.758
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.758
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.758
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.758
Ca_15642 Cicer arietinum Ca_15642 I 0.758
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.758
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.758
30169.m006340 Ricinus communis 30169.m006340 I 0.747
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.747
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.747
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.747
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.747
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.747
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.747
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.747
MDP0000284409 Malus domestica MDP0000284409 I 0.747
MDP0000268890 Malus domestica MDP0000268890 I 0.747
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.747
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.747
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.747
MDP0000121203 Malus domestica MDP0000121203 I 0.747
Pm011040 Prunus mume Pm011040 I 0.747
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.747
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.747
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.747
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.747
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.747
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.747
Solyc02g069440.2 Solanum lycopersicum Solyc02g069440.2 I 0.747
Si026864m.g Setaria italica Si026864m.g I 0.747
Pm000277 Prunus mume Pm000277 I 0.747
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.747
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.747
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.737
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.737
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.737
PGSC0003DMG402023851 Solanum tuberosum PGSC0003DMG402023851 I 0.736
MDP0000265429 Malus domestica MDP0000265429 I 0.736
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.736
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.736
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.736
GRMZM2G447176 Zea mays GRMZM2G447176 I 0.736
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.736
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I 0.736
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.736
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.736
Gorai.010G170700 Gossypium raimondii Gorai.010G170700 I 0.736
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.736
Bra014907 Brassica rapa Bra014907 I 0.736
Bra018335 Brassica rapa Bra018335 I 0.736
Bo4g059700 Brassica oleracea Bo4g059700 I 0.736
LBD12 Arabidopsis thaliana AT2G30130 I 0.736
LBD4 Arabidopsis thaliana AT1G31320 D 0.736
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.736
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.736
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.736
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.736
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.736
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.736
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.736
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.736
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.736
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.736
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.736
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.736
mgf018189m Mimulus guttatus mgf018189m I 0.736
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.736
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.736
Ca_08998 Cicer arietinum Ca_08998 I 0.736
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.736
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.736
Cla009336 Citrullus lanatus Cla009336 I 0.736
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.736
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.736
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.724
orange1.1g041989m.g Citrus sinensis orange1.1g041989m.g I 0.724
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I 0.724
TCM_042447 Theobroma cacao TCM_042447 I 0.724
OPUNC03G25820 Oryza punctata OPUNC03G25820 I 0.724
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.724
Ciclev10006208m.g Citrus clementina Ciclev10006208m.g I 0.724
PK24688.1 Cannabis sativa PK24688.1 I 0.724
Cla007354 Citrullus lanatus Cla007354 I 0.724
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.724
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.724
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.724
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.724
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.724
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.724
F775_24149 Aegilops tauschii F775_24149 I 0.724
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.724
Bo7g041000 Brassica oleracea Bo7g041000 I 0.724
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.724
TRIUR3_27421 Triticum urartu TRIUR3_27421 I 0.724
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.724
GLYMA15G13410 Glycine max GLYMA15G13410 I 0.724
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.724
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.724
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.724
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.724
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.724
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.724
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.717
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.717
Si024229m.g Setaria italica Si024229m.g I 0.713
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.713
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.713
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.713
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.713
OBART05G12620 Oryza barthii OBART05G12620 I 0.713
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.713
mgf022958m Mimulus guttatus mgf022958m I 0.713
GLYMA15G41020 Glycine max GLYMA15G41020 I 0.713
MDP0000861160 Malus domestica MDP0000861160 I 0.713
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.713
POPTR_0001s28840 Populus trichocarpa POPTR_0001s28840 I 0.713
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.713
TCM_042212 Theobroma cacao TCM_042212 I 0.713
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.713
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.713
PK29334.1 Cannabis sativa PK29334.1 I 0.703
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.701
GSMUA_Achr4G32000_001 Musa acuminata GSMUA_Achr4G32000_001 I 0.701
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.701
ORGLA12G0001500 Oryza glaberrima ORGLA12G0001500 I 0.701
OGLUM12G00350 Oryza glumaepatula OGLUM12G00350 I 0.701
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.701
GLYMA18G02780 Glycine max GLYMA18G02780 I 0.701
F775_08326 Aegilops tauschii F775_08326 I 0.701
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.701
Ca_13388 Cicer arietinum Ca_13388 I 0.701
GSMUA_Achr2G13170_001 Musa acuminata GSMUA_Achr2G13170_001 I 0.701
Si011647m.g Setaria italica Si011647m.g I 0.701
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.701