PRUPE_ppa011757mg (Prunus persica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PRUPE_ppa011757mg T245916_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.848 0.848
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.848 0.848
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ19647 LOB 18 116

Links

Other LOB family TFs
Other Prunus persica TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.990
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.990
TCM_045438 Theobroma cacao TCM_045438 I 0.990
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.990
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.990
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.990
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.990
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.980
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.980
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.970
29729.m002335 Ricinus communis 29729.m002335 I 0.970
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.970
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.970
MDP0000278334 Malus domestica MDP0000278334 I 0.970
PK17217.1 Cannabis sativa PK17217.1 I 0.970
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.970
LBD15 Arabidopsis thaliana AT2G40470 I 0.960
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.960
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.960
Ca_04126 Cicer arietinum Ca_04126 I 0.960
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.960
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.960
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.960
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.960
Bo3g034980 Brassica oleracea Bo3g034980 I 0.949
Bra000188 Brassica rapa Bra000188 I 0.949
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.949
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.949
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.949
Bo4g012620 Brassica oleracea Bo4g012620 I 0.939
Bo4g190210 Brassica oleracea Bo4g190210 I 0.939
Bra004572 Brassica rapa Bra004572 I 0.939
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.939
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.939
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.939
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.939
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.939
PK21617.1 Cannabis sativa PK21617.1 I 0.935
Bra016992 Brassica rapa Bra016992 I 0.929
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.929
Cla007391 Citrullus lanatus Cla007391 I 0.929
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.929
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.919
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.919
TCM_042262 Theobroma cacao TCM_042262 I 0.919
Ca_12420 Cicer arietinum Ca_12420 I 0.919
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.909
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.909
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.909
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.909
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.909
OB05G14280 Oryza brachyantha OB05G14280 I 0.908
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.902
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.899
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.899
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.899
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.899
29957.m001411 Ricinus communis 29957.m001411 I 0.899
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.899
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.899
mgf011471m Mimulus guttatus mgf011471m I 0.899
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.899
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.899
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.890
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.889
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.889
mgf020556m Mimulus guttatus mgf020556m I 0.889
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.889
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.889
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.889
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.889
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.879
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.879
OBART05G04570 Oryza barthii OBART05G04570 I 0.879
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.879
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.879
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.879
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.879
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.879
OS05G0165450 Oryza sativa OS05G0165450 I 0.879
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.879
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.879
Ca_15642 Cicer arietinum Ca_15642 I 0.879
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.879
Si012018m.g Setaria italica Si012018m.g I 0.869
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.869
Pm000277 Prunus mume Pm000277 I 0.869
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.869
Bo4g172950 Brassica oleracea Bo4g172950 I 0.859
Bra021627 Brassica rapa Bra021627 I 0.859
F775_52636 Aegilops tauschii F775_52636 I 0.859
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.859
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.859
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.859
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.859
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.859
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.859
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.859
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.859
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.859
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.859
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.859
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.859
PK03716.1 Cannabis sativa PK03716.1 I 0.853
LBD13 Arabidopsis thaliana AT2G30340 D 0.848
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.848
Bo4g059520 Brassica oleracea Bo4g059520 I 0.848
Bra018320 Brassica rapa Bra018320 I 0.848
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.848
F775_25790 Aegilops tauschii F775_25790 I 0.848
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.848
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.848
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.848
OB01G44400 Oryza brachyantha OB01G44400 I 0.848
OBART01G35680 Oryza barthii OBART01G35680 I 0.848
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.848
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.848
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.848
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.848
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.848
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.848
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.848
OS01G0825000 Oryza sativa OS01G0825000 I 0.848
Si004575m.g Setaria italica Si004575m.g I 0.848
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.848
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.848
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.848
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.848
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.848
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.848
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.848
Bo4g190140 Brassica oleracea Bo4g190140 I 0.842
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.838
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.838
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.838
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.838
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.838
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.828
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.818
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.808
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.797
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.768
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.746
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.737
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.737
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.727
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.727
Si026864m.g Setaria italica Si026864m.g I 0.727
TCM_032557 Theobroma cacao TCM_032557 I 0.727
30169.m006340 Ricinus communis 30169.m006340 I 0.727
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.727
PK29334.1 Cannabis sativa PK29334.1 I 0.719
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.717
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.717
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.717
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.717
Pm011040 Prunus mume Pm011040 I 0.717
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.717
mgf026046m Mimulus guttatus mgf026046m I 0.717
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
MDP0000268890 Malus domestica MDP0000268890 I 0.717
MDP0000284409 Malus domestica MDP0000284409 I 0.717
Pavir.J06256 Panicum virgatum Pavir.J06256 I 0.717
Pavir.J13923 Panicum virgatum Pavir.J13923 I 0.717
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.717
F775_33210 Aegilops tauschii F775_33210 I 0.712
LBD4 Arabidopsis thaliana AT1G31320 D 0.707
Bo3g024350 Brassica oleracea Bo3g024350 I 0.707
Bra022780 Brassica rapa Bra022780 I 0.707
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.707
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
SELMODRAFT_49084 Selaginella moellendorffii SELMODRAFT_49084 I 0.707
SELMODRAFT_49085 Selaginella moellendorffii SELMODRAFT_49085 I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.707
Ca_12450 Cicer arietinum Ca_12450 I 0.707
Ca_13575 Cicer arietinum Ca_13575 I 0.707
Cla013678 Citrullus lanatus Cla013678 I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.707
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.707
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I 0.707
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I 0.707
Carubv10010462m.g Capsella rubella Carubv10010462m.g I 0.707
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.707
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
MDP0000121203 Malus domestica MDP0000121203 I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.707
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I 0.707
PK11564.1 Cannabis sativa PK11564.1 I 0.707
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.707
PK18922.1 Cannabis sativa PK18922.1 I 0.702