IRF5 (Oryctolagus cuniculus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSOCUG00000010101 T244256_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M02256_2.00		 Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.962 0.962
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.962 0.962
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.962 0.962
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.962 0.962
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.962 0.962
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.962 0.962
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.962 0.962
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.952 0.952
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.724 0.724
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.714 0.714
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02256_2.00 IRF 16 121

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000008702 IRF 16 121

Links

Other IRF family TFs
Other Oryctolagus cuniculus TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N
Ca_11130 Cicer arietinum Ca_11130 N
Cla005525 Citrullus lanatus Cla005525 N
Pm014866 Prunus mume Pm014866 N
29872.m000537 Ricinus communis 29872.m000537 N
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N
Cucsa.180010 Cucumis sativus Cucsa.180010 N
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N
TCM_002021 Theobroma cacao TCM_002021 N
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N
MDP0000269044 Malus domestica MDP0000269044 N
MDP0000287321 Malus domestica MDP0000287321 N
MDP0000289554 Malus domestica MDP0000289554 N
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N
PK21090.1 Cannabis sativa PK21090.1 N
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N
ONIVA07G17430 Oryza nivara ONIVA07G17430 N
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N
GLYMA11G10220 Glycine max GLYMA11G10220 N
GLYMA12G02530 Glycine max GLYMA12G02530 N
GRMZM2G106548 Zea mays GRMZM2G106548 N
LPERR07G16410 Leersia perrieri LPERR07G16410 N
MLOC_62589 Hordeum vulgare MLOC_62589 N
OBART07G19080 Oryza barthii OBART07G19080 N
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N
OLONG_002258 Oryza longistaminata OLONG_002258 N
OMERI07G15800 Oryza meridionalis OMERI07G15800 N
BGIOSGA025964 Oryza indica BGIOSGA025964 N
OPUNC07G17970 Oryza punctata OPUNC07G17970 N
OPUNC07G18000 Oryza punctata OPUNC07G18000 N
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N
OS07G0567700 Oryza sativa OS07G0567700 N
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N
Si032551m.g Setaria italica Si032551m.g N
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N