CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000010982
(
Tarsius syrichta
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSTSYG00000010982
T244444_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf6
M00176_2.00
Mus musculus
NNNHGADASN
NSTHTCDNNN
PBM
Badis et al.(2009)
Irf6_3803
1.000
1.000
IRF6
M05527_2.00
Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX
1.000
1.000
IRF6
M05529_2.00
Homo sapiens
ACCGAAACT
AGTTTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX
1.000
1.000
IRF6
M05528_2.00
Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX
1.000
1.000
IRF6
M05530_2.00
Homo sapiens
ACCGAWACY
RGTWTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX
1.000
1.000
IRF6
M02254_2.00
Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN
PBM
Weirauch et al.(2014)
pTH9210
0.943
0.943
IRF6
M02253_2.00
Gallus gallus
NNMCNAAWNN
NNWTTNGKNN
PBM
Weirauch et al.(2014)
pTH9178
0.933
0.933
irf6.2
M02259_2.00
Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN
PBM
Weirauch et al.(2014)
pTH9302
0.914
0.914
irf5.L
M02260_2.00
Xenopus laevis
VNCGADACHN
NDGTHTCGNB
PBM
Weirauch et al.(2014)
pTH9367
0.790
0.790
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000010066
IRF
9
114
RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVC
Links
Other
IRF
family TFs
Other
Tarsius syrichta
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Usf2
Mus musculus
ENSMUSG00000058239
D
USF2
Homo sapiens
ENSG00000105698
D
ENSSTOG00000022219
Ictidomys tridecemlineatus
ENSSTOG00000022219
I
ENSONIG00000016360
Oreochromis niloticus
ENSONIG00000016360
I
USF2
Oryzias latipes
ENSORLG00000015114
I
usf1
Oryzias latipes
ENSORLG00000015402
I
ENSPANG00000011040
Papio anubis
ENSPANG00000011040
I
USF2
Procavia capensis
ENSPCAG00000013941
I
ENSPFOG00000005160
Poecilia formosa
ENSPFOG00000005160
I
ENSPFOG00000017027
Poecilia formosa
ENSPFOG00000017027
I
ENSPPYG00000009855
Pongo abelii
ENSPPYG00000009855
I
ENSPSIG00000008600
Pelodiscus sinensis
ENSPSIG00000008600
I
USF2
Pan troglodytes
ENSPTRG00000010836
I
USF2
Pteropus vampyrus
ENSPVAG00000004161
I
Usf2
Rattus norvegicus
ENSRNOG00000053725
I
USF2
Sus scrofa
ENSSSCG00000002885
I
USF2
Oryctolagus cuniculus
ENSOCUG00000026259
I
usf1
Tetraodon nigroviridis
ENSTNIG00000014361
I
USF2
Takifugu rubripes
ENSTRUG00000005182
I
usf1
Takifugu rubripes
ENSTRUG00000005343
I
ENSXMAG00000005137
Xiphophorus maculatus
ENSXMAG00000005137
I
ENSXMAG00000006484
Xiphophorus maculatus
ENSXMAG00000006484
I
Alligator_sinensis_CCG004656.1
Alligator sinensis
Alligator_sinensis_CCG004656.1
I
Cmyd_10000422
Chelonia mydas
Cmyd_10000422
I
ENSP00000222305-D1
Bos grunniens
ENSP00000222305-D1
I
Myotis_brandtii_Usf2_10035177
Myotis brandtii
Myotis_brandtii_Usf2_10035177
I
Pvit_11612
Pogona vitticeps
Pvit_11612
I
usf2.S
Xenopus laevis
XB-GENE-6253011
I
usf2.L
Xenopus laevis
XB-GENE-991248
I
ENSGMOG00000009783
Gadus morhua
ENSGMOG00000009783
I
ENSAMEG00000000235
Ailuropoda melanoleuca
ENSAMEG00000000235
I
ENSAMXG00000009564
Astyanax mexicanus
ENSAMXG00000009564
I
USF2
Bos taurus
ENSBTAG00000017035
I
USF2
Canis familiaris
ENSCAFG00000007054
I
USF2
Callithrix jacchus
ENSCJAG00000010451
I
USF2
Cavia porcellus
ENSCPOG00000012147
I
ENSCSAG00000004521
Chlorocebus sabaeus
ENSCSAG00000004521
I
usf2
Danio rerio
ENSDARG00000020228
I
USF2
Dasypus novemcinctus
ENSDNOG00000003072
I
USF2
Equus caballus
ENSECAG00000008583
I
USF2
Felis catus
ENSFCAG00000008894
I
usf1
Gasterosteus aculeatus
ENSGACG00000005115
I
USF2
Gasterosteus aculeatus
ENSGACG00000012475
I
USF2
Otolemur garnettii
ENSOGAG00000001476
I
ENSGMOG00000013274
Gadus morhua
ENSGMOG00000013274
I
ENSLACG00000003269
Latimeria chalumnae
ENSLACG00000003269
I
USF2
Loxodonta africana
ENSLAFG00000029360
I
ENSLOCG00000005321
Lepisosteus oculatus
ENSLOCG00000005321
I
USF2
Microcebus murinus
ENSMICG00000001519
I
ENSMLUG00000028063
Myotis lucifugus
ENSMLUG00000028063
I
USF2
Macaca mulatta
ENSMMUG00000011291
I
USF2
Monodelphis domestica
ENSMODG00000013843
I
ENSMPUG00000007099
Mustela putorius furo
ENSMPUG00000007099
I
ENSNLEG00000011114
Nomascus leucogenys
ENSNLEG00000011114
I
ENSOARG00000004745
Ovis aries
ENSOARG00000004745
I
USF2
Anolis carolinensis
ENSACAG00000010293
I