ORGLA05G0143500 (Oryza glaberrima)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 ORGLA05G0143500 T245731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.889 0.889
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0143500.1 LOB 42 140

Links

Other LOB family TFs
Other Oryza glaberrima TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAD9 Homo sapiens ENSG00000120693 D
SMAD3 Homo sapiens ENSG00000166949 D
SMAD1 Homo sapiens ENSG00000170365 D
Smad9 Mus musculus ENSMUSG00000027796 D
Smad3 Mus musculus ENSMUSG00000032402 D
Smad9 Rattus norvegicus ENSRNOG00000000091 D
Mad Drosophila melanogaster FBgn0011648 D
ACEP23524 Atta cephalotes ACEP23524 I
Aqu1.222022 Amphimedon queenslandica Aqu1.222022 I
Aqu1.229822 Amphimedon queenslandica Aqu1.229822 I
BGIBMGA010481 Bombyx mori BGIBMGA010481 I
CapteG167863 Capitella teleta CapteG167863 I
CGI_10014747 Crassostrea gigas CGI_10014747 I
CGI_10017370 Crassostrea gigas CGI_10017370 I
DAPPUDRAFT_300607 Daphnia pulex DAPPUDRAFT_300607 I
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I
EFV60166 Trichinella spiralis EFV60166 I
SMAD1 Anolis carolinensis ENSACAG00000003544 I
SMAD9 Anolis carolinensis ENSACAG00000004463 I
SMAD3 Anolis carolinensis ENSACAG00000009914 I
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I
ENSAMEG00000014442 Ailuropoda melanoleuca ENSAMEG00000014442 I
ENSAMEG00000016645 Ailuropoda melanoleuca ENSAMEG00000016645 I
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I
ENSAMXG00000016178 Astyanax mexicanus ENSAMXG00000016178 I
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I
ENSAPLG00000009135 Anas platyrhynchos ENSAPLG00000009135 I
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I
ENSAPLG00000012107 Anas platyrhynchos ENSAPLG00000012107 I
SMAD1 Bos taurus ENSBTAG00000002835 I
SMAD9 Bos taurus ENSBTAG00000007589 I
SMAD3 Bos taurus ENSBTAG00000012599 I
SMAD9 Canis familiaris ENSCAFG00000006162 I
SMAD1 Canis familiaris ENSCAFG00000007659 I
SMAD3 Canis familiaris ENSCAFG00000017388 I
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I
SMAD1 Choloepus hoffmanni ENSCHOG00000009259 I
ENSCING00000006188 Ciona intestinalis ENSCING00000006188 I
SMAD3 Callithrix jacchus ENSCJAG00000002088 I
SMAD1 Callithrix jacchus ENSCJAG00000002542 I
SMAD1 Cavia porcellus ENSCPOG00000009073 I
SMAD9 Cavia porcellus ENSCPOG00000010255 I
SMAD3 Cavia porcellus ENSCPOG00000021314 I
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I
ENSCSAG00000017872 Chlorocebus sabaeus ENSCSAG00000017872 I
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I
smad3b Danio rerio ENSDARG00000010207 I
smad9 Danio rerio ENSDARG00000021938 I
smad3a Danio rerio ENSDARG00000036096 I
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I
SMAD1 Dasypus novemcinctus ENSDNOG00000048112 I
SMAD9 Dasypus novemcinctus ENSDNOG00000048385 I
Smad9 Dipodomys ordii ENSDORG00000002526 I
SMAD9 Equus caballus ENSECAG00000012534 I
SMAD3 Equus caballus ENSECAG00000020259 I
SMAD1 Equus caballus ENSECAG00000022649 I
SMAD1 Erinaceus europaeus ENSEEUG00000008384 I
SMAD3 Echinops telfairi ENSETEG00000003356 I
SMAD1 Echinops telfairi ENSETEG00000016533 I
SMAD9 Echinops telfairi ENSETEG00000020236 I
ENSFALG00000005536 Ficedula albicollis ENSFALG00000005536 I
ENSFALG00000008280 Ficedula albicollis ENSFALG00000008280 I
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I
SMAD9 Felis catus ENSFCAG00000003813 I
SMAD1 Felis catus ENSFCAG00000004136 I
SMAD3 Felis catus ENSFCAG00000027081 I
smad3b Gasterosteus aculeatus ENSGACG00000005092 I
SMAD3 Gasterosteus aculeatus ENSGACG00000016882 I
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I
SMAD1 Gallus gallus ENSGALG00000009977 I
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I
SMAD9 Gallus gallus ENSGALG00000017050 I
SMAD9 Gorilla gorilla ENSGGOG00000001017 I
ENSGGOG00000022121 Gorilla gorilla ENSGGOG00000022121 I
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I
ENSLACG00000011178 Latimeria chalumnae ENSLACG00000011178 I
ENSLACG00000011249 Latimeria chalumnae ENSLACG00000011249 I
SMAD9 Loxodonta africana ENSLAFG00000002903 I
SMAD1 Loxodonta africana ENSLAFG00000018345 I
ENSLOCG00000008478 Lepisosteus oculatus ENSLOCG00000008478 I
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I
ENSMEUG00000007556 Macropus eugenii ENSMEUG00000007556 I
ENSMEUG00000016668 Macropus eugenii ENSMEUG00000016668 I
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I
SMAD1 Meleagris gallopavo ENSMGAG00000003725 I
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I
SMAD9 Meleagris gallopavo ENSMGAG00000015060 I
SMAD9 Microcebus murinus ENSMICG00000003343 I
SMAD3 Microcebus murinus ENSMICG00000006119 I
SMAD2 Microcebus murinus ENSMICG00000007882 I
SMAD3 Myotis lucifugus ENSMLUG00000002185 I
SMAD9 Myotis lucifugus ENSMLUG00000006399 I
SMAD1 Myotis lucifugus ENSMLUG00000012261 I
SMAD9 Macaca mulatta ENSMMUG00000009914 I
SMAD3 Macaca mulatta ENSMMUG00000015455 I
SMAD1 Macaca mulatta ENSMMUG00000018384 I
SMAD1 Monodelphis domestica ENSMODG00000000500 I
SMAD3 Monodelphis domestica ENSMODG00000009609 I
SMAD9 Monodelphis domestica ENSMODG00000010017 I
ENSMPUG00000000304 Mustela putorius furo ENSMPUG00000000304 I
ENSMPUG00000001838 Mustela putorius furo ENSMPUG00000001838 I
ENSMPUG00000006867 Mustela putorius furo ENSMPUG00000006867 I
Smad1 Mus musculus ENSMUSG00000031681 I
ENSNLEG00000001639 Nomascus leucogenys ENSNLEG00000001639 I
ENSNLEG00000005537 Nomascus leucogenys ENSNLEG00000005537 I
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I
SMAD1 Ornithorhynchus anatinus ENSOANG00000006538 I
SMAD5 Ornithorhynchus anatinus ENSOANG00000009906 I
SMAD9 Ornithorhynchus anatinus ENSOANG00000015497 I
ENSOARG00000009089 Ovis aries ENSOARG00000009089 I
ENSOARG00000018276 Ovis aries ENSOARG00000018276 I
SMAD9 Oryctolagus cuniculus ENSOCUG00000007453 I
SMAD1 Otolemur garnettii ENSOGAG00000000150 I
SMAD9 Otolemur garnettii ENSOGAG00000002742 I
SMAD3 Otolemur garnettii ENSOGAG00000014217 I
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I
ENSONIG00000012614 Oreochromis niloticus ENSONIG00000012614 I
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I
SMAD9 Ochotona princeps ENSOPRG00000004923 I
SMAD3 Ochotona princeps ENSOPRG00000014996 I
smad3a Oryzias latipes ENSORLG00000002207 I
smad9 Oryzias latipes ENSORLG00000003956 I
smad3b Oryzias latipes ENSORLG00000006803 I
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I
ENSPANG00000014460 Papio anubis ENSPANG00000014460 I
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I
ENSPANG00000016688 Papio anubis ENSPANG00000016688 I
SMAD9 Procavia capensis ENSPCAG00000002604 I
SMAD3 Procavia capensis ENSPCAG00000008103 I
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I
ENSPFOG00000015910 Poecilia formosa ENSPFOG00000015910 I
ENSPFOG00000015984 Poecilia formosa ENSPFOG00000015984 I
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I
ENSPPYG00000005285 Pongo abelii ENSPPYG00000005285 I
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I
ENSPSIG00000002483 Pelodiscus sinensis ENSPSIG00000002483 I
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I
ENSPSIG00000016396 Pelodiscus sinensis ENSPSIG00000016396 I
SMAD9 Pan troglodytes ENSPTRG00000005788 I
SMAD3 Pan troglodytes ENSPTRG00000007199 I
SMAD1 Pan troglodytes ENSPTRG00000016485 I
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I
SMAD9 Pteropus vampyrus ENSPVAG00000013871 I
SMAD1 Pteropus vampyrus ENSPVAG00000014298 I
Smad3 Rattus norvegicus ENSRNOG00000008620 I
Smad1 Rattus norvegicus ENSRNOG00000018483 I
LOC103691556 Rattus norvegicus ENSRNOG00000058416 I
SMAD2 Sorex araneus ENSSARG00000003487 I
SMAD9 Sorex araneus ENSSARG00000011878 I
ENSSHAG00000001186 Sarcophilus harrisii ENSSHAG00000001186 I
ENSSHAG00000006387 Sarcophilus harrisii ENSSHAG00000006387 I
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I
SMAD3 Sus scrofa ENSSSCG00000004952 I
SMAD9 Sus scrofa ENSSSCG00000009357 I
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I
ENSSTOG00000007103 Ictidomys tridecemlineatus ENSSTOG00000007103 I
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I
SMAD9 Tupaia belangeri ENSTBEG00000011491 I
SMAD1 Tupaia belangeri ENSTBEG00000016459 I
SMAD1 Taeniopygia guttata ENSTGUG00000002675 I
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I
SMAD9 Taeniopygia guttata ENSTGUG00000011897 I
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I
smad9 Tetraodon nigroviridis ENSTNIG00000009925 I
smad9 Takifugu rubripes ENSTRUG00000001196 I
ENSTRUG00000002512 Takifugu rubripes ENSTRUG00000002512 I
smad3b Takifugu rubripes ENSTRUG00000014802 I
smad3a Takifugu rubripes ENSTRUG00000016858 I
ENSTSYG00000005021 Tarsius syrichta ENSTSYG00000005021 I
SMAD9 Tursiops truncatus ENSTTRG00000007903 I
SMAD1 Tursiops truncatus ENSTTRG00000008086 I
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I
ENSXMAG00000008595 Xiphophorus maculatus ENSXMAG00000008595 I
GF20577 Drosophila ananassae FBgn0097583 I
GG24457 Drosophila erecta FBgn0116589 I
GH10284 Drosophila grimshawi FBgn0117765 I
GI17981 Drosophila mojavensis FBgn0140721 I
GL26531 Drosophila persimilis FBgn0164113 I
GM18164 Drosophila sechellia FBgn0173071 I
GD22774 Drosophila simulans FBgn0194168 I
GJ19553 Drosophila virilis FBgn0206695 I
GK18268 Drosophila willistoni FBgn0220267 I
GE14935 Drosophila yakuba FBgn0232525 I
GA28973 Drosophila pseudoobscura FBgn0250331 I
HelroG185435 Helobdella robusta HelroG185435 I
HelroG186716 Helobdella robusta HelroG186716 I
ISCW001846 Ixodes scapularis ISCW001846 I
L798_03803 Zootermopsis nevadensis L798_03803 I
L798_14024 Zootermopsis nevadensis L798_14024 I
LotgiG104873 Lottia gigantea LotgiG104873 I
LotgiG189014 Lottia gigantea LotgiG189014 I
ML011743a Mnemiopsis leidyi ML011743a I
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I
NV10880 Nasonia vitripennis NV10880 I
PHUM033930 Pediculus humanus PHUM033930 I
PHUM612490 Pediculus humanus PHUM612490 I
PHUM612590 Pediculus humanus PHUM612590 I
SMAR008230 Strigamia maritima SMAR008230 I
SMAR012602 Strigamia maritima SMAR012602 I
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I
tetur04g09040 Tetranychus urticae tetur04g09040 I
TriadG49742 Trichoplax adhaerens TriadG49742 I
TriadG50301 Trichoplax adhaerens TriadG50301 I
Aan_R002236 Calypte anna Aan_R002236 I
Aan_R003078 Calypte anna Aan_R003078 I
Aan_R005227 Calypte anna Aan_R005227 I
Aan_R005610 Calypte anna Aan_R005610 I
Afo_R003117 Aptenodytes forsteri Afo_R003117 I
Afo_R005797 Aptenodytes forsteri Afo_R005797 I
Afo_R015053 Aptenodytes forsteri Afo_R015053 I
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I
Alligator_sinensis_CCG006386.1 Alligator sinensis Alligator_sinensis_CCG006386.1 I
Alligator_sinensis_CCG012577.1 Alligator sinensis Alligator_sinensis_CCG012577.1 I
Brh_R001114 Buceros rhinoceros Brh_R001114 I
Brh_R001115 Buceros rhinoceros Brh_R001115 I
Brh_R002100 Buceros rhinoceros Brh_R002100 I
Brh_R009512 Buceros rhinoceros Brh_R009512 I
Cmyd_10015900 Chelonia mydas Cmyd_10015900 I
ENSBTAP00000003668-D1 Bos grunniens ENSBTAP00000003668-D1 I
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I
ENSBTAP00000029021-D3 Bos grunniens ENSBTAP00000029021-D3 I
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I
ENSP00000332973 Macaca fascicularis ENSP00000332973 I
ENSP00000377652 Macaca fascicularis ENSP00000377652 I
ENSP00000382216 Macaca fascicularis ENSP00000382216 I
Gfo_R000868 Geospiza fortis Gfo_R000868 I
Gfo_R005758 Geospiza fortis Gfo_R005758 I
Gfo_R005908 Geospiza fortis Gfo_R005908 I
Gfo_R012055 Geospiza fortis Gfo_R012055 I
Myotis_brandtii_SMAD1_10016918 Myotis brandtii Myotis_brandtii_SMAD1_10016918 I
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I
Ogr00592 Ophisaurus gracilis Ogr00592 I
Ogr07749 Ophisaurus gracilis Ogr07749 I
Pvit_02496 Pogona vitticeps Pvit_02496 I
Pvit_04328 Pogona vitticeps Pvit_04328 I
Tal_R001210 Tyto alba Tal_R001210 I
Tal_R004006 Tyto alba Tal_R004006 I
Tal_R004657 Tyto alba Tal_R004657 I
Tal_R011237 Tyto alba Tal_R011237 I
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I
Sakowv30001252m.g Saccoglossus kowalevskii Sakowv30001252m.g I
AAB39329 Xenopus laevis AAB39329 I
AAK02019 Xenopus laevis AAK02019 I
AAL86773 Xenopus laevis AAL86773 I
AAL86774 Xenopus laevis AAL86774 I
LDEC015977 Leptinotarsa decemlineata LDEC015977 I
smad3 Xenopus tropicalis XB-GENE-481992 I
smad9 Xenopus tropicalis XB-GENE-484686 I
smad3.L Xenopus laevis XB-GENE-864816 I
smad2.S Xenopus laevis XB-GENE-864923 I
smad9.S Xenopus laevis XB-GENE-865114 I
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I
ADIR005117 Anopheles dirus ADIR005117 I
BGLB001215 Biomphalaria glabrata BGLB001215 I
BGLB010651 Biomphalaria glabrata BGLB010651 I
PPAI005080 Phlebotomus papatasi PPAI005080 I
D917_04509 Trichinella nativa D917_04509 I
D918_06928 Trichuris suis D918_06928 I
D918_09504 Trichuris suis D918_09504 I
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I
TsM_000781600 Taenia solium TsM_000781600 I
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I