cassava38982.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava38982.m1 T246474_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava38982.m1 LOB 4 106

Links

Other LOB family TFs
Other Manihot esculenta TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava23439.valid.m1 Manihot esculenta cassava23439.valid.m1 I
POPTR_0005s10610 Populus trichocarpa POPTR_0005s10610 I
Cucsa.119310 Cucumis sativus Cucsa.119310 N
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N
mgf013168m Mimulus guttatus mgf013168m N
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N
Carubv10014350m.g Capsella rubella Carubv10014350m.g N
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N
Lus10003333.g Linum usitatissimum Lus10003333.g N
MDP0000480581 Malus domestica MDP0000480581 N
MDP0000868556 Malus domestica MDP0000868556 N
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N
anac036 Arabidopsis thaliana AT2G17040 N
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N
Bo3g092020 Brassica oleracea Bo3g092020 N
Bo7g015050 Brassica oleracea Bo7g015050 N
Bo9g024360 Brassica oleracea Bo9g024360 N
Bra002018 Brassica rapa Bra002018 N
Bra013034 Brassica rapa Bra013034 N
Bra037283 Brassica rapa Bra037283 N
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N
GLYMA11G10230 Glycine max GLYMA11G10230 N
GLYMA12G02540 Glycine max GLYMA12G02540 N
MTR_4g075980 Medicago truncatula MTR_4g075980 N
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N
TCM_006499 Theobroma cacao TCM_006499 N
anac036 Vitis vinifera VIT_03s0038g03410 N
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N
Ca_11128 Cicer arietinum Ca_11128 N
Cla007018 Citrullus lanatus Cla007018 N
Pm020961 Prunus mume Pm020961 N
29797.m000353 Ricinus communis 29797.m000353 N
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N