Bra004859 (Brassica rapa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bra004859 T248012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004859.1-P MADF 54 135

Links

Other MADF family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N
ENSPFOG00000019374 Poecilia formosa ENSPFOG00000019374 N
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N
prdm1 Takifugu rubripes ENSTRUG00000000404 N
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N
ENSXMAG00000003417 Xiphophorus maculatus ENSXMAG00000003417 N
GL12308 Drosophila persimilis FBgn0149915 N
Afo_R003683 Aptenodytes forsteri Afo_R003683 N
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N
prdm1a Oryzias latipes ENSORLG00000015684 N
Gfo_R012197 Geospiza fortis Gfo_R012197 N
Ogr18550 Ophisaurus gracilis Ogr18550 N
Pvit_09291 Pogona vitticeps Pvit_09291 N
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N
prdm1.S Xenopus laevis XB-GENE-853257 N
XP_002937203 Xenopus tropicalis XP_002937203 N
EEL_0000388201 Elaeophora elaphi EEL_0000388201 N
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N
PRDM1 Bos taurus ENSBTAG00000000816 N
ZNF683 Dasypus novemcinctus ENSDNOG00000043822 N
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N
PRDM1 Anolis carolinensis ENSACAG00000005496 N
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N
ENSMPUG00000015726 Mustela putorius furo ENSMPUG00000015726 N
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N
ENSORLG00000012948 Oryzias latipes ENSORLG00000012948 N