AMTR_s00025p00244880 (Amborella trichopoda)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AMTR_s00025p00244880 T252807_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN12671 MADS box 10 57

Links

Other MADS box family TFs
Other Amborella trichopoda TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.750
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.729
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.771
Si019951m.g Setaria italica Si019951m.g I 0.750
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.750
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.750
F775_43210 Aegilops tauschii F775_43210 I 0.729
F775_04223 Aegilops tauschii F775_04223 I 0.771
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.750
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.750
Bra014628 Brassica rapa Bra014628 I 0.708
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.729
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.729
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.729
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.708
gw1.81.151.1 Physcomitrella patens gw1.81.151.1 N 0.750
gw1.88.220.1 Physcomitrella patens gw1.88.220.1 N 0.750
Aquca_005_00477 Aquilegia coerulea Aquca_005_00477 N 0.708
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.729
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.729
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.708
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.708
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.708
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.729
OB01G55160 Oryza brachyantha OB01G55160 N 0.708
OBART01G45740 Oryza barthii OBART01G45740 N 0.729
OBART09G00850 Oryza barthii OBART09G00850 N 0.729
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.729
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.729
OS09G0116800 Oryza sativa OS09G0116800 N 0.729
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.729
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.729
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.729
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.729
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.729
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.750
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.729
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.729
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.729
OS01G0975800 Oryza sativa OS01G0975800 N 0.729