Bo8g104060 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo8g104060 T253190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g104060.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brassica oleracea TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB24 Arabidopsis thaliana AT5G40350 D 0.000
MYB05_ANTMA Antirrhinum majus MYB05_ANTMA D 0.000
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I 0.000
BGIOSGA004072 Oryza indica BGIOSGA004072 I 0.000
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.000
BGIOSGA011479 Oryza indica BGIOSGA011479 I 0.000
BGIOSGA020382 Oryza indica BGIOSGA020382 I 0.000
Bo2g057760 Brassica oleracea Bo2g057760 I 0.000
Bo5g043390 Brassica oleracea Bo5g043390 I 0.000
Bra033948 Brassica rapa Bra033948 I 0.000
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.000
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.000
BRADI2G11430 Brachypodium distachyon BRADI2G11430 I 0.000
F775_02242 Aegilops tauschii F775_02242 I 0.000
F775_14949 Aegilops tauschii F775_14949 I 0.000
GLYMA05G08690 Glycine max GLYMA05G08690 I 0.000
GLYMA10G01330 Glycine max GLYMA10G01330 I 0.000
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.000
GLYMA19G00930 Glycine max GLYMA19G00930 I 0.000
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.000
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.000
GRMZM2G054111 Zea mays GRMZM2G054111 I 0.000
GRMZM2G070849 Zea mays GRMZM2G070849 I 0.000
GRMZM2G134279 Zea mays GRMZM2G134279 I 0.000
GRMZM2G143328 Zea mays GRMZM2G143328 I 0.000
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.000
GSMUA_Achr11G20830_001 Musa acuminata GSMUA_Achr11G20830_001 I 0.000
GSMUA_Achr1G27270_001 Musa acuminata GSMUA_Achr1G27270_001 I 0.000
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I 0.000
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.000
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.000
GSMUA_Achr6G27290_001 Musa acuminata GSMUA_Achr6G27290_001 I 0.000
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.000
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I 0.000
GSMUA_AchrUn_randomG08600_001 Musa acuminata GSMUA_AchrUn_randomG08600_001 I 0.000
LPERR01G20550 Leersia perrieri LPERR01G20550 I 0.000
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.000
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.000
MLOC_5568 Hordeum vulgare MLOC_5568 I 0.000
MLOC_68593 Hordeum vulgare MLOC_68593 I 0.000
MLOC_9927 Hordeum vulgare MLOC_9927 I 0.000
MTR_1g086510 Medicago truncatula MTR_1g086510 I 0.000
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.000
MTR_7g035075 Medicago truncatula MTR_7g035075 I 0.000
OB01G33330 Oryza brachyantha OB01G33330 I 0.000
OB03G13340 Oryza brachyantha OB03G13340 I 0.000
OB03G25040 Oryza brachyantha OB03G25040 I 0.000
OBART01G24030 Oryza barthii OBART01G24030 I 0.000
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I 0.000
OMERI01G22060 Oryza meridionalis OMERI01G22060 I 0.000
ONIVA01G27030 Oryza nivara ONIVA01G27030 I 0.000
OPUNC01G24010 Oryza punctata OPUNC01G24010 I 0.000
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I 0.000
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I 0.000
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.000
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.000
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I 0.000
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I 0.000
OS01G0128000 Oryza sativa OS01G0128000 I 0.000
OS01G0637800 Oryza sativa OS01G0637800 I 0.000
OS03G0142600 Oryza sativa OS03G0142600 I 0.000
MYB2 Oryza sativa OS03G0315400 I 0.000
PGSC0003DMG400000485 Solanum tuberosum PGSC0003DMG400000485 I 0.000
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.000
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.000
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.000
Sb01g047450 Sorghum bicolor Sb01g047450 I 0.000
Sb03g029050 Sorghum bicolor Sb03g029050 I 0.000
Si003841m.g Setaria italica Si003841m.g I 0.000
Si003965m.g Setaria italica Si003965m.g I 0.000
Si022474m.g Setaria italica Si022474m.g I 0.000
Si035722m.g Setaria italica Si035722m.g I 0.000
Si037281m.g Setaria italica Si037281m.g I 0.000
Solyc02g067760.2 Solanum lycopersicum Solyc02g067760.2 I 0.000
TCM_016901 Theobroma cacao TCM_016901 I 0.000
Traes_1AL_91299CB97 Triticum aestivum Traes_1AL_91299CB97 I 0.000
Traes_1AS_36AF74187 Triticum aestivum Traes_1AS_36AF74187 I 0.000
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I 0.000
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.000
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.000
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.000
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.000
TRIUR3_25064 Triticum urartu TRIUR3_25064 I 0.000
VIT_14s0066g01090 Vitis vinifera VIT_14s0066g01090 I 0.000
Ca_03536 Cicer arietinum Ca_03536 I 0.000
Cla017370 Citrullus lanatus Cla017370 I 0.000
Pm015692 Prunus mume Pm015692 I 0.000
Cucsa.339770 Cucumis sativus Cucsa.339770 I 0.000
mgf000555m Mimulus guttatus mgf000555m I 0.000
Aquca_002_00135 Aquilegia coerulea Aquca_002_00135 I 0.000
Bostr.7200s0008 Boechera stricta Bostr.7200s0008 I 0.000
Carubv10007254m.g Capsella rubella Carubv10007254m.g I 0.000
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.000
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.000
Eucgr.H04082 Eucalyptus grandis Eucgr.H04082 I 0.000
Eucgr.I01782 Eucalyptus grandis Eucgr.I01782 I 0.000
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.000
evm.TU.supercontig_186.7 Carica papaya evm.TU.supercontig_186.7 I 0.000
gene28435-v1.0-hybrid Fragaria vesca gene28435-v1.0-hybrid I 0.000
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.000
Gorai.004G146000 Gossypium raimondii Gorai.004G146000 I 0.000
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I 0.000
Lus10014557.g Linum usitatissimum Lus10014557.g I 0.000
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.000
Lus10032129.g Linum usitatissimum Lus10032129.g I 0.000
Lus10038062.g Linum usitatissimum Lus10038062.g I 0.000
MDP0000344978 Malus domestica MDP0000344978 I 0.000
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.000
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.000
Pavir.Ba00256 Panicum virgatum Pavir.Ba00256 I 0.000
Pavir.Ca00957 Panicum virgatum Pavir.Ca00957 I 0.000
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I 0.000
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I 0.000
Pavir.J03771 Panicum virgatum Pavir.J03771 I 0.000
Pavir.J05460 Panicum virgatum Pavir.J05460 I 0.000
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.000
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.000
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.000
SapurV1A.0358s0050 Salix purpurea SapurV1A.0358s0050 I 0.000
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.000
Thhalv10027930m.g Eutrema salsugineum Thhalv10027930m.g I 0.000
F775_32337 Aegilops tauschii F775_32337 N 0.000
Si024431m.g Setaria italica Si024431m.g N 0.000
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N 0.000
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N 0.000
Pavir.Eb01665 Panicum virgatum Pavir.Eb01665 N 0.000