Bo8g104960 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo8g104960 T253191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g104960.1 MADS box 52 99

Links

Other MADS box family TFs
Other Brassica oleracea TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC083 Arabidopsis thaliana AT5G13180 D
Pm007070 Prunus mume Pm007070 I
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I
30128.m009035 Ricinus communis 30128.m009035 I
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I
Cucsa.349370 Cucumis sativus Cucsa.349370 I
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I
Bostr.23794s0753 Boechera stricta Bostr.23794s0753 I
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I
Carubv10002548m.g Capsella rubella Carubv10002548m.g I
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I
evm.TU.supercontig_99.63 Carica papaya evm.TU.supercontig_99.63 I
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I
Lus10001809.g Linum usitatissimum Lus10001809.g I
Lus10002581.g Linum usitatissimum Lus10002581.g I
MDP0000126517 Malus domestica MDP0000126517 I
MDP0000130123 Malus domestica MDP0000130123 I
MDP0000147080 Malus domestica MDP0000147080 I
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I
Thhalv10017152m.g Eutrema salsugineum Thhalv10017152m.g I
NAC041 Arabidopsis thaliana AT2G33480 I
Bo4g181990 Brassica oleracea Bo4g181990 I
Bra006186 Brassica rapa Bra006186 I
Bra008849 Brassica rapa Bra008849 I
Bra021856 Brassica rapa Bra021856 I
Bra023395 Brassica rapa Bra023395 I
ANAC041 Arabidopsis lyrata fgenesh2_kg.4__1354__AT2G33480.1 I
GLYMA08G47520 Glycine max GLYMA08G47520 I
GLYMA18G53954 Glycine max GLYMA18G53954 I
Cla001517 Citrullus lanatus Cla001517 I
MTR_7g005280 Medicago truncatula MTR_7g005280 I
Bra005492 Brassica rapa Bra005492 I
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I
Bo9g168950 Brassica oleracea Bo9g168950 I
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I
ANAC083 Arabidopsis lyrata scaffold_601328.1 I
Bo4g043670 Brassica oleracea Bo4g043670 I
TCM_008477 Theobroma cacao TCM_008477 I
TCM_014713 Theobroma cacao TCM_014713 I
Bo3g009040 Brassica oleracea Bo3g009040 I
ANAC083 Vitis vinifera VIT_01s0146g00280 I
Bo2g011120 Brassica oleracea Bo2g011120 I
GSMUA_Achr6G16560_001 Musa acuminata GSMUA_Achr6G16560_001 N
SapurV1A.0614s0190 Salix purpurea SapurV1A.0614s0190 N
SapurV1A.1562s0030 Salix purpurea SapurV1A.1562s0030 N
SapurV1A.1562s0040 Salix purpurea SapurV1A.1562s0040 N
SapurV1A.1580s0010 Salix purpurea SapurV1A.1580s0010 N
MDP0000130686 Malus domestica MDP0000130686 N
PGSC0003DMG400011891 Solanum tuberosum PGSC0003DMG400011891 N
Carubv10023833m.g Capsella rubella Carubv10023833m.g N
POPTR_0012s10530 Populus trichocarpa POPTR_0012s10530 N
Cagra.0301s0034 Capsella grandiflora Cagra.0301s0034 N
POPTR_0015s11420 Populus trichocarpa POPTR_0015s11420 N
PRUPE_ppa027024mg Prunus persica PRUPE_ppa027024mg N
Solyc01g009860.2 Solanum lycopersicum Solyc01g009860.2 N
cassava37235.valid.m1 Manihot esculenta cassava37235.valid.m1 N
30147.m014441 Ricinus communis 30147.m014441 N
Pm024558 Prunus mume Pm024558 N