CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT1G62085
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT1G62085
T262043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G62085.1
mTERF
91
435
LSLLRSHGFTDSQISSIITDYPQLLVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADKSSKFEKLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGKENFEESLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFL
AT1G62085.2
mTERF
91
435
LSLLRSHGFTDSQISSIITDYPQLLVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADKSSKFEKLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGKENFEESLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFL
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.765
Bostr.22157s0159
Boechera stricta
Bostr.22157s0159
N
0.772
Thhalv10028140m.g
Eutrema salsugineum
Thhalv10028140m.g
N
0.701
Thhalv10023457m.g
Eutrema salsugineum
Thhalv10023457m.g
N
0.707
Carubv10020276m.g
Capsella rubella
Carubv10020276m.g
N
0.768
Carubv10020267m.g
Capsella rubella
Carubv10020267m.g
N
0.714
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
0.814
Carubv10018684m.g
Capsella rubella
Carubv10018684m.g
N
0.714
Cagra.0448s0035
Capsella grandiflora
Cagra.0448s0035
N
0.716
Cagra.0043s0023
Capsella grandiflora
Cagra.0043s0023
N
0.772
Cagra.0043s0010
Capsella grandiflora
Cagra.0043s0010
N
0.714
Bostr.22157s0170
Boechera stricta
Bostr.22157s0170
N
0.720
Bostr.22157s0168
Boechera stricta
Bostr.22157s0168
N
0.714
Bostr.22157s0164
Boechera stricta
Bostr.22157s0164
N
0.765
AT1G61960
Arabidopsis thaliana
AT1G61960
N
0.727
Bostr.22157s0138
Boechera stricta
Bostr.22157s0138
N
0.820
Bostr.22157s0134
Boechera stricta
Bostr.22157s0134
N
0.707
Bostr.22157s0091
Boechera stricta
Bostr.22157s0091
N
0.740
Bostr.18473s0264
Boechera stricta
Bostr.18473s0264
N
0.723
scaffold_200344.1
Arabidopsis lyrata
scaffold_200344.1
N
0.730
scaffold_200307.1
Arabidopsis lyrata
scaffold_200307.1
N
0.719
Bo9g040760
Brassica oleracea
Bo9g040760
N
0.734
AT1G62150
Arabidopsis thaliana
AT1G62150
N
0.717
AT1G62110
Arabidopsis thaliana
AT1G62110
N
0.759