BRADI4G16290 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI4G16290 T268331_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.811 0.925
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.808 0.903
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.808 0.903
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.778 0.892
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.778 0.892
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.778 0.892
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.778 0.892
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.774 0.871
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.774 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G16290.1 Myb 16 63
BRADI4G16290.1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.000
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.000
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.000
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.000
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.000
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.000
Si007288m.g Setaria italica Si007288m.g I 0.000
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.000
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.000
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.000
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L889_g13720 Steinernema feltiae L889_g13720 N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
GPUH_0002275001 Gongylonema pulchrum GPUH_0002275001 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.000
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.000
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.000
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.000
fgenesh2_pg.scaffold_4000274 Monosiga brevicollis fgenesh2_pg.scaffold_4000274 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
CBG20663 Caenorhabditis briggsae CBG20663 N 0.000
CBN04053 Caenorhabditis brenneri CBN04053 N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
ENSMEUG00000004078 Macropus eugenii ENSMEUG00000004078 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
PPA12247 Pristionchus pacificus PPA12247 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
Hsal_03836--NA Harpegnathos saltator Hsal_03836--NA N 0.000
BTMF_0000420901 Brugia timori BTMF_0000420901 N 0.000
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.000
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.000
ASIS014204 Anopheles sinensis ASIS014204 N 0.000
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000