OMERI05G05690 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI05G05690 T276098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.881 0.894
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.881 0.894
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.881 0.894
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.860 0.872
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.842 0.915
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.824 0.851
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.824 0.851
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.824 0.851
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.821 0.872
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.813 0.851
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.811 0.851
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.811 0.894
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.799 0.809
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.799 0.809
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.799 0.809
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.781 0.851
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.781 0.851
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.709 0.681
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.709 0.681
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.704 0.809
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.704 0.809
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.704 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI05G05690.1 Myb 122 169

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

596 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL7 Arabidopsis thaliana AT5G18830 D
Ciclev10004348m.g Citrus clementina Ciclev10004348m.g I
Traes_1BL_8709BB152 Triticum aestivum Traes_1BL_8709BB152 I
Carubv10002913m.g Capsella rubella Carubv10002913m.g I
Cagra.0263s0012 Capsella grandiflora Cagra.0263s0012 I
Bostr.26527s0326 Boechera stricta Bostr.26527s0326 I
Aquca_026_00098 Aquilegia coerulea Aquca_026_00098 I
mgf004695m Mimulus guttatus mgf004695m I
Cucsa.253690 Cucumis sativus Cucsa.253690 I
cassava7956.valid.m1 Manihot esculenta cassava7956.valid.m1 I
cassava7955.valid.m1 Manihot esculenta cassava7955.valid.m1 I
cassava1985.valid.m1 Manihot esculenta cassava1985.valid.m1 I
29726.m003959 Ricinus communis 29726.m003959 I
Pm008092 Prunus mume Pm008092 I
Cla022022 Citrullus lanatus Cla022022 I
SPL7 Vitis vinifera VIT_05s0020g02160 I
PK29723.1 Cannabis sativa PK29723.1 I
Eucgr.B01228 Eucalyptus grandis Eucgr.B01228 I
gene06692-v1.0-hybrid Fragaria vesca gene06692-v1.0-hybrid I
Gorai.005G056500 Gossypium raimondii Gorai.005G056500 I
Gorai.011G183800 Gossypium raimondii Gorai.011G183800 I
Lus10012782.g Linum usitatissimum Lus10012782.g I
Lus10033993.g Linum usitatissimum Lus10033993.g I
MDP0000195461 Malus domestica MDP0000195461 I
MDP0000271587 Malus domestica MDP0000271587 I
orange1.1g003787m.g Citrus sinensis orange1.1g003787m.g I
Pavir.J00965 Panicum virgatum Pavir.J00965 I
Pavir.J03653 Panicum virgatum Pavir.J03653 I
SapurV1A.0152s0370 Salix purpurea SapurV1A.0152s0370 I
SapurV1A.0407s0040 Salix purpurea SapurV1A.0407s0040 I
Thhalv10012721m.g Eutrema salsugineum Thhalv10012721m.g I
AMTR_s00197p00030350 Amborella trichopoda AMTR_s00197p00030350 I
OBART05G16150 Oryza barthii OBART05G16150 I
Bo00629s160 Brassica oleracea Bo00629s160 I
Bo9g154530 Brassica oleracea Bo9g154530 I
Bra002188 Brassica rapa Bra002188 I
Bra023695 Brassica rapa Bra023695 I
BRADI2G25580 Brachypodium distachyon BRADI2G25580 I
F775_04392 Aegilops tauschii F775_04392 I
GLYMA13G28460 Glycine max GLYMA13G28460 I
GRMZM2G109354 Zea mays GRMZM2G109354 I
GSMUA_Achr3G09190_001 Musa acuminata GSMUA_Achr3G09190_001 I
GSMUA_Achr3G23780_001 Musa acuminata GSMUA_Achr3G23780_001 I
GSMUA_Achr5G26880_001 Musa acuminata GSMUA_Achr5G26880_001 I
GSMUA_Achr9G17440_001 Musa acuminata GSMUA_Achr9G17440_001 I
LPERR05G12780 Leersia perrieri LPERR05G12780 I
MTR_2g020620 Medicago truncatula MTR_2g020620 I
OB05G24080 Oryza brachyantha OB05G24080 I
TCM_021101 Theobroma cacao TCM_021101 I
OGLUM05G17090 Oryza glumaepatula OGLUM05G17090 I
OLONG_015968 Oryza longistaminata OLONG_015968 I
ONIVA05G16770 Oryza nivara ONIVA05G16770 I
OPUNC05G14270 Oryza punctata OPUNC05G14270 I
ORUFI05G17320 Oryza rufipogon ORUFI05G17320 I
SPL9 Oryza sativa OS05G0408200 I
PGSC0003DMG401006284 Solanum tuberosum PGSC0003DMG401006284 I
POPTR_0008s20160 Populus trichocarpa POPTR_0008s20160 I
POPTR_0010s02710 Populus trichocarpa POPTR_0010s02710 I
PRUPE_ppa001613mg Prunus persica PRUPE_ppa001613mg I
Sb09g020110 Sorghum bicolor Sb09g020110 I
SPL7 Arabidopsis lyrata scaffold_601959.1 I
Si021754m.g Setaria italica Si021754m.g I
Solyc01g080670.2 Solanum lycopersicum Solyc01g080670.2 I