TCM_012087 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_012087 T280482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.753 0.882
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.753 0.882
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.683 0.763
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.683 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY20741 Myb 196 242
EOY20741 Myb 248 293

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I
Lus10034276.g Linum usitatissimum Lus10034276.g I
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I
Carubv10010429m.g Capsella rubella Carubv10010429m.g I
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I
mgf023686m Mimulus guttatus mgf023686m I
TRIUR3_24950 Triticum urartu TRIUR3_24950 I
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I
F775_20738 Aegilops tauschii F775_20738 I
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I
OB05G32250 Oryza brachyantha OB05G32250 I
F775_21292 Aegilops tauschii F775_21292 I
F775_21293 Aegilops tauschii F775_21293 I
GRMZM2G018336 Zea mays GRMZM2G018336 I
GRMZM2G065538 Zea mays GRMZM2G065538 I
MLOC_38822 Hordeum vulgare MLOC_38822 I
MLOC_44012 Hordeum vulgare MLOC_44012 I
OB01G12610 Oryza brachyantha OB01G12610 I
OB01G36520 Oryza brachyantha OB01G36520 I
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I
OBART01G02620 Oryza barthii OBART01G02620 I
OGLUM01G02860 Oryza glumaepatula OGLUM01G02860 I
OLONG_000415 Oryza longistaminata OLONG_000415 I
OLONG_010584 Oryza longistaminata OLONG_010584 I
OPUNC04G20430 Oryza punctata OPUNC04G20430 I
OB10G24100 Oryza brachyantha OB10G24100 N
TRIUR3_10777 Triticum urartu TRIUR3_10777 N
Traes_4BL_F6827247E Triticum aestivum Traes_4BL_F6827247E N
Traes_3DS_CC9498D91 Triticum aestivum Traes_3DS_CC9498D91 N
Traes_3AS_82DEC629B Triticum aestivum Traes_3AS_82DEC629B N